EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-00468

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:25132100-25132860

Target genes

Number: 9
Name	Ensembl ID

NIPAL3	ENSG00000001461
C1orf201	ENSG00000001460
RCAN3	ENSG00000117602
C1orf130	ENSG00000184454
RP11	ENSG00000227312
SRRM1	ENSG00000133226
snoU13	ENSG00000238986
CLIC4	ENSG00000169504
U6	ENSG00000238482

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nkx2-5(var.2)

MA0503.1

chr1:25132309-25132320

AGCCACTCAAG

6.62

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I024806

chr1

25132491

25132891

Enhancer Sequence

GCTCCATTTA AAAGATAAGG CCTACATACC TAGTACTTTT TTCTTCGTTG GGCAAGTCAA 60
CTTGTTACAG ATGGGTCATC TTCAAGAGCC AGCTCCGGTG TTCTCTAGCT ATGCTGCACT 120
CATTTCATAC CAAGCAGCTG GAACTGAGTC ACCAGCCCAG CTTCCTCCAA TTGTTGCAAT 180
TGTACTGAAC TACATTTTAA TAGAAATTAA GCCACTCAAG TCTCTTAAAA TATTAGCTCC 240
TATAGGATTC CTCCTTTTCA TTCGTTTCTT TTCCTTTTGG TTTTTGTTTT TATTTCCTTT 300
TCTTCATCTA GAAAAAAAAT GGGAAACAAC AGAATAATTT ATTTCATCTG AAAGACTACC 360
ATGATACATG AGGGTAAAAA TAATACACCC CAAAACACTG GAGAATATTT GCACCCTGTT 420
GCAAGGCATG AGTTCTGTGC ACTTTGCTCT TGATGTCACG TAAGGGAAAT ATTTGAATGA 480
GTTTTAATCA AGTGTTGAGT ATTTACTGAA GGCCTTTTTG GAAGTAAACC AAAGATGTCT 540
TGAAATTTTT TGCCATTGCC TATTGGCTCA GTTTCATTTA TCTCAAACTG CAATTCTTAC 600
AGTGTTACAT TTCTGTGAAA CATCTGTAAA ATGAGCCTTT GTGGGTCAAA CAGAACACCT 660
GAGGCCTGAG AGGGCAGGTG AGAACTGCAA GTTGAAGAAT CTTAGATTCT GTTTTGTTGA 720
TACATAGCTT GTGAGTGAAT CAGATTACTG TTTAGAACTT 760