EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-00145

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:9448370-9449440

Target genes

Number: 8
Name	Ensembl ID

SCARNA16	ENSG00000252404
MIR34A	ENSG00000207865
H6PD	ENSG00000049239
RP13	ENSG00000231181
TMEM201	ENSG00000188807
PIK3CD	ENSG00000171608
CLSTN1	ENSG00000171603
7SK	ENSG00000202415

dbSUPER

Number of super-enhancer constituents: 7
ID	Coordinate	Tissue/cell

SE_01570	chr1:9448129-9449342	Aorta
SE_04130	chr1:9443864-9451348	Brain_Anterior_Caudate
SE_05237	chr1:9443633-9450490	Brain_Cingulate_Gyrus
SE_05868	chr1:9441853-9449857	Brain_Hippocampus_Middle
SE_07340	chr1:9443972-9449861	Brain_Hippocampus_Middle_150
SE_08488	chr1:9443923-9450450	Brain_Inferior_Temporal_Lobe
SE_47313	chr1:9448151-9449546	Panc1

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I009388

chr1

9448314

9449276

Enhancer Sequence

TTTATAGAGG GGGAAACTGA GGCACAAAAG GGGAAAGGTT TGACCAAAGC GTGACTCACA 60
GCTGTCAGGA GGCAGGGCCA GGGTTCAGAC AGAGACTGTT CTGACTCCGA GCCATGCCTT 120
GTCCCCTCAG CCTCTCTGTG CCCCGCGCTG CCTGGCACTG TGTTAGCTCA AGACGTATTT 180
ATTCAATGCA CGATCTGGAA TAAACAAAGC CCTCCCAGCT CGCACATCAG CCACTCAAAC 240
AAGCATTTGT TGAGGATGTT GAGGGTGACA AAGGCAGCGT TTGGCCAGCC GCTCTGACTT 300
CCTGGGCCTC CAGGCCGTCC AGGCACAAGC TGATCTGAGA GGAGACAAAA GGGAGACGTC 360
CACAGACAGG ATAAGTGTCG AGTGCCCCAC TCTGCTGCAC CCCTGGGGAA GCTCAGAGGC 420
TGGGGTTTTA GATTTGGGCG TGGCACTTGC TGAATATCTC CTAAGGCCTG GGTAATCTGC 480
TAACATCCGA AGTCCCACTA GAGCCTCTCA AAAAAGGGGA GCAAGTCCCC TTTTTACAGC 540
AGGAGAAGCT GAGGCCCAGA GGGTTCAAGG GCGGTCCAGG GTCACATAGC CTGATTATGG 600
TAGGCAGGGT TCCTCCAGAG CCTCCGTGGG GAGCATCTGG GGCCACAGTG CCTGAAGCTG 660
GAAGGGCACA CTTTGAAGCA GCAGCTTGGC CAGCCGGGGT GGAGCTGAGT CATCTGTCCC 720
TGGGGAAGAT TTATGGTGCT GAAGTCTTTG GGACCAGGTC GGGGGTGAGG ACTAAATTCT 780
GACCTTTTTT CTCTCTTGCC CAAATTCCTA CCTAAGGGGC CTAGGGAGTG TGAAAGGAAA 840
ATAAATCTTG GGATCCCAAA ATCACTAAGC TAAAGGGAAA AGTCAAGCTG GGAACTGCTT 900
AGGGCAAACC TGCCTCCCAC TCTATTCCTT AAAAAAAAAA GCTACTAAGA TTAAAACAAA 960
AAAAAAAACA AAAAACTAAA TGGCCGGGCA CGGTGGCTCA CGCCTGTAAT CCCAGCACTT 1020
CAGGAGGCTG AGGTGGGTGG ATCACAAAGT CAGGAGATCG AGACCATCCT 1070