EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS092-23029

Organism

Homo sapiens

Tissue/cell

HFF

Coordinate

chr19:47352240-47353390

Target genes

Number: 24
Name	Ensembl ID

PPP5C	ENSG00000011485
PNMAL1	ENSG00000182013
AC011551.1	ENSG00000249210
CALM3	ENSG00000160014
PTGIR	ENSG00000160013
CTB	ENSG00000245598
DACT3	ENSG00000197380
PRKD2	ENSG00000105287
FKRP	ENSG00000181027
STRN4	ENSG00000090372
SLC1A5	ENSG00000105281
AP2S1	ENSG00000042753
ARHGAP35	ENSG00000160007
NPAS1	ENSG00000130751
TMEM160	ENSG00000130748
ZC3H4	ENSG00000130749
SAE1	ENSG00000142230
BBC3	ENSG00000105327
CCDC9	ENSG00000105321
PRR24	ENSG00000257704
C5AR1	ENSG00000197405
DHX34	ENSG00000134815
MEIS3	ENSG00000105419
KPTN	ENSG00000118162

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOSL1	MA0477.1	chr19:47352541-47352552	CATGAGTCACC	-	6.62
JUND	MA0491.1	chr19:47352541-47352552	CATGAGTCACC	-	6.02
RREB1	MA0073.1	chr19:47352607-47352627	CCCCCAACCAACCAAACTGG	+	6.34

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_45556	chr19:47351548-47354413	Osteoblasts
SE_54267	chr19:47352119-47354597	Spleen

Enhancer Sequence

TACAGGCGCG AGTCACTGTG CCCAGCCTTT TTTTTTTTTT TTTTTTTGAG ACAGAGTCTC 60
ACTCTGTCGC CTAGGCCAGT GGCACAATCT CGGCTCACTG CAGCCTCTGC CTCCCGGGTT 120
CAAGCGATTC TCCTGCCTCA GCCTCCCAAG TAGCTGGGAT TACAGGCATC CACCACCACA 180
CCTGGCTTAT TTTTGTATTT TTAGTAGAGA CGGGGTCTCA CCACGTTGGC CAGGCTGGTC 240
TCGAACTCCT GACCTTATGT GATCCGCCTG CCTCAGCCTC CCAAAGTGCT GGGATTACAG 300
GCATGAGTCA CCGCCCCAGC CTGAGAGTCT TTCCTAAGCC TCATTCTCCA CACACTCTAT 360
CCTCCCTCCC CCAACCAACC AAACTGGACC GGAACAGGAT GTTACACTCT CCTTCCAAGA 420
ACTCCTGCTG AGCCAGGGAA AACCACTTCC TAGCAGGGCA GGGGTCCCAG GCAGGAAGGG 480
ACGTTGGGGG GCCTACACCA GGCAGCCACA GCCTGGGAGC AGAGCCGGAG ACATATTCAC 540
ACAGTTAGGA GAACTAGAAG CAAACCCACA GAGTTGACAA AAAGCTCTGC CTCTTACTCC 600
CAAATTCCCT TGTATACCTC TCCCTGTTTT CTTCCCATTT GGAATCTCAA GTCCCCTCCG 660
TCCTGAATCT CTGCATCCTC ACGCCTCTGC TGTCCCCTCT AGATGCCCCC CAACCTTCCC 720
TGTCTCCAAT CCCCCTCCTC TGGAGTTGTT CCCTTTTGAC CTCCACTTTC TCAGTCTCAG 780
TTCCCCTCCT TGGGGCCTCA ATGGGCTTTT TACTGGTGAC ATCCCTTGTC CCACTCCCAA 840
GCTTCCTCCC TTCTTCAAAA GGTCACATTT TGCCTCCAAG GACCCTGTTC CTGGAGGAGA 900
CTCCGCCCCC GCTCTGACAC TCTTTCTCAT TCGTTTTCTT TCCCAACTTC CAGCCCAAAG 960
AACCCTTTCC TAGATCCAAA GCCCCAACCT GGGGGATAGG GGCACTCCTA AATCCAATGT 1020
TGAGTCTTTG CCCCAACAAA GATTCCTCCC CAGGTCTCAC ACTTTCAAGC CTACTCCCCA 1080
CCCCACAAGA TCTCTCCTCT TGGAAAGACC TATTCAGTTG CTCCCCATTC TTTCCGAGTG 1140
TCCATCTTAC 1150