EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS092-22313

Organism

Homo sapiens

Tissue/cell

HFF

Coordinate

chr19:6423140-6424460

Target genes

Number: 11
Name	Ensembl ID

NDUFA11	ENSG00000174886
CAPS	ENSG00000105519
MLLT1	ENSG00000130382
CLPP	ENSG00000125656
ALKBH7	ENSG00000125652
PSPN	ENSG00000125650
GTF2F1	ENSG00000125651
KHSRP	ENSG00000088247
SLC25A41	ENSG00000181240
SLC25A23	ENSG00000125648
TUBB4A	ENSG00000104833

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Arntl	MA0603.1	chr19:6424390-6424400	GCACGTGACC	-	6.02
Foxd3	MA0041.1	chr19:6423289-6423301	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr19:6423293-6423305	AAACAAACAAAC	-	6.32
PLAG1	MA0163.1	chr19:6424170-6424184	GGGGGCTAAGGGGG	+	6.95
USF2	MA0526.2	chr19:6424333-6424349	CGCCCACGTGACCCCG	-	6.47
ZIC3	MA0697.1	chr19:6424303-6424318	GCGCAGCGGGAGGGC	-	6.25

Enhancer Sequence

TTAGCTGGGT GTGGTGGTGC ACACTTATAA TCCCAGCTAC TCGGGAGGCT GAGGCAGGAG 60
GAGCACTTCA ACTGGAGAGG TGGAGGCTGT GGTGTGCTGA GATCGTGCCA CTGCACCCCT 120
GCCTGGGTGA TATTGAGACT GTTTCCAAAA AACAAACAAA CAAACAAAAA ACCAAGACTC 180
TATGGGACAC AAGTTACATC TCAGACACGT GAAGAGCAAC TTTAAAGAAA CCTCAACCCA 240
GCAAACTTAG GATCAGAGTC TGGGGTTTAG AAACCCAAAC CATGTTAAGA ATCTCCCTTT 300
CCACCAGTCT CCATTTTTCT ACGCTGCCCT AGAGCCAAAA CTCATGGGAT GCCCACAGGG 360
GGCCTGTCCC CACCAACTGA CAGCACCAGC TTCCTCCCTT CAAGCTGTCC CAGAATCAGA 420
CGGTTCCATG GGCAATAAGA CCAAATGCAC GCTAGAACCC ACCCAACTCC AAGGGTGAGA 480
GAGACGACAG AGGGCCAGAA CACAGGCGTT CACTTAACGG GACCTCCCAC CTTGGGAGGA 540
GCCAGTCTCT AGCCCCGGAG GCATTGGGAC AGCCCAGGAG CCGGTCGGCG GCAAAGTCCT 600
CCCATTCTAC CGACCCCCAC CCCTCCAGGC CATGGGGAGG CTGCAAATGG AGCTGGAGAG 660
GTCAGTCCTA GCAGCATGTG ACACTTCCTT GTCATTACGC CTCAATACAC GGGGGTGGGA 720
GACCCTCCCT TCTTTCCCCC AAAGAGACAG ACCACGCTTT CAAGCCACCA AAGCATCCAA 780
GAGCCAGTCC CCATGCTCGT CTTCCCCATT TCGCCCAAGT GCTCAGCCCT AGACAGGTCC 840
CCATCCACTT TCCCGACTGA AGAGGAAGGA CTGTCCCTCC CACCCCCACA ATGTCCCTTT 900
CTCCTAGAGA GGGGACAGAA ATGGGACTGG GTTGGGGGCA AACACTGCCC TTTGCCCTGA 960
TATGGAGGGG AGAGTAAAGG CCCTCCGCCC GGGAAGGTGG ACCCCTGCCT CCAGGCATGT 1020
CCTAAGGCCG GGGGGCTAAG GGGGGGGTCC CAAAAGTGCG TCTCCGAGCT CCGGGGCGCC 1080
TGCACACCCA GGCGCCGCTC CTGGTGACCC CCAGTGCGCC CCTACTCCCT GCAGGGGGGT 1140
CACCCGTTGG GATCCCACTC GAGGCGCAGC GGGAGGGCCA GGCCCCCGCC TACCGCCCAC 1200
GTGACCCCGC GACGGCCCCG GCCCCCCTCC GCGACCCTGC GCGCGCGCGC GCACGTGACC 1260
CCCGCCCCCT CCCCCGCCTG CGCGCGCGCG CGAGCGCGCC CCTCAGGCCC TCGGCCTCCT 1320