EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS092-12789

Organism

Homo sapiens

Tissue/cell

HFF

Coordinate

chr12:88865180-88867340

Target genes

Number: 5
Name	Ensembl ID

C12orf29	ENSG00000133641
CEP290	ENSG00000198707
TMTC3	ENSG00000139324
KITLG	ENSG00000049130
DUSP6	ENSG00000139318

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXC1	MA0032.2	chr12:88866429-88866440	ATGTTTACTTA	-	6.02
JUN	MA0488.1	chr12:88866704-88866717	ATGACATCATTGT	-	6.33
JUND(var.2)	MA0492.1	chr12:88866703-88866718	CATGACATCATTGTC	-	6.05
LBX2	MA0699.1	chr12:88865767-88865777	GCTAATTGGC	-	6.02
POU2F2	MA0507.1	chr12:88866465-88866478	ATTATTTGCATAT	+	6.14

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH12I088471	chr12	88865101	88866474
GH12I088472	chr12	88866681	88866870

Enhancer Sequence

AATAAAATGA TGCCAACTAT ATCGTAATGC AGTATGTCCC TACTAAAATT AAATATGCTG 60
TAACTCTGAA AAATTGGCCA TTTTTCATAT GGCTGTGTCA AACAGCAGCA TAGACAAATC 120
ACCAAATAAG TATTCCACAG TTAAATAAAT GTGTATCCCG AATCTAACTC AAATTATGTG 180
CTTGGGTCTT GTATGTTACT TCCAAATACA ACCTGCGACT TCATTGATTT TTCAGACAAT 240
TCACAGGTTT CACTGAACTT ATTCTTTTGC ACCAATTTTC TGGCATTTGA AAGGCTGTAT 300
TCATAAGTTT AGCTAGAAAA TATTTATAAG CCCTATGGTG CCAGGCACTG GCAAATGTCC 360
TCCCCTGGAC ATGTACTGAA GGGAACAAGC CACACAACTC CTTTCCCTCC CACATAATCC 420
CTATGATTCA CTGGAATTGG ATGACCTTCC TGGGAACTCT TTACTGTGGC CTCTGTGGGT 480
GCCAAAAGCC CAAGAAAGCT TGCTGAGTTG TTCTCATTCA AATACTGCGC TTGCTGGGTT 540
CTTATTCAGG CCTCTTTAGA CACACTTCCT TCTTGCTCAG CAAAACTGCT AATTGGCACA 600
GAAAATATCC TAGCTTTGTC CATTTTCTAT AGAAGTTGAA AATGCTTCTA CCTGACTGTG 660
CTGACAGAAT TATATTTTCA ATGGTATGAA TACTCCAGAC ATTTCAATGA CAACTTTGGG 720
AACAAAATAA TACATATAAT AGAGTTGGTT GGTCTTAAAC AGCCTCATGC CTCAGTATAA 780
GTGACCAGAA GCAAAAATCC TCCAAAATTA GGGGCTAAGA CATGAGCGTT TGGGATATAA 840
TCATTTACAT TTGACAAAGG CTGCACATAG TGCCTTTCTG TTTCTGTGAT TTTTACCTTA 900
ATTGGTTCAT TTTCACTATT ATACATTTAA TCTGTTTGTC ACTAGTAATA AATAAGCAGG 960
GCTGTTGTGA TTGGTTGCCA ATAATTATTT TTCCATCAGC TCAAGAAAGC ATGTTGCAAT 1020
GCCAGGAGTA AAGAAAATTC TCCTTGTATT TGTCATTGGC CAGGTGCCCA AGTCTCATAT 1080
ATGTCTTGGT GAGGGTGCTG TGGGGAGACC CTTTAATTCA TATTTTTCGG TCCTGCCTCC 1140
TTCTCACGGA CTTGTGTAGA GGGAAAAAAG AGCTATAATT ACTTGTAAGA GCACTTGGAT 1200
CAGGTGACAA AATTATTGAA AACCTTTTAA GCCATGATTA GCCATTTGAA TGTTTACTTA 1260
TGTCCACTTC CAAGAACTAC CTTAAATTAT TTGCATATGT TTGTATGTAT GCAACTTGTT 1320
TGAATTTATG GAGATGTATA AAGGTTTTGT TGAGTCTTCA GAAGACAGAG GATAATGATG 1380
CTCTTTAGCT GTGATATTTT ATGCTCGTCA GATATATTGA TACATACTGC ATTCAGAAAT 1440
ATCAGGAGAT TATTAATATT TTGCCTTGTA TTTCTAATTG CATATTGTTA GGTTTTGGGC 1500
TATTCACTGA CAAGATTGTA ATTCATGACA TCATTGTCCT TGTGTTTAAA AGATCATGCC 1560
AACACAATGA CTAACCAGGT AGATGGTTAT ATACGGAAAA ATCCAGTCAT TGGTATTCAT 1620
TTCTGTACTC CATGTAAAAG AAGTTCATTT ATGCTGTCCT GTTTTCAGTG CTAGAAGTTA 1680
TTTGATTCCA TGAAATTCTA TGTGCTCACA ATATGCCCGG AACTGTGGTA TAAATACTTG 1740
AATGGACAAA AAAGAAGTCT CCCAGAGAAC TTTTGTTTAG ATCCTGTTTG AATTGTGATT 1800
CCTAATTCTT GCCAAGTTGT TTGTTGAAAT TAACTTTTAA AGAACAGTTT CAAAGGGTAA 1860
TAGTTTATTC TCTCCCCAAC TTCCCCCAAA TTAAAGAACC ATTAATTTGT GAAGCAAAAT 1920
TAAAAACAAT TTTCAATAAC ACAGTGAGTC AAATGGATGG GTGCTTGAGT AGGAAAAAAG 1980
TGCCAGATAA AATAGAATTG ACAGTTCTAG AAATAAACCC AAAATACACA TGGGAATTTA 2040
GTGTGTGGCA GATCCATTAT TTCAAGTCAG TGGGGAAAGA TCAATTAGTT GACAGGCATT 2100
GTTGAGACAG CTGGCTAGTC ACTTGGATGA AGAGGAAGCT GGATCTGTAT TTTAGAACCC 2160