EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS092-03085

Organism

Homo sapiens

Tissue/cell

HFF

Coordinate

chr1:120532650-120534020

Target genes

Number: 11
Name	Ensembl ID

RP4	ENSG00000260941
ZNF697	ENSG00000143067
PHGDH	ENSG00000092621
NBPF7	ENSG00000215864
RP5	ENSG00000261662
NOTCH2	ENSG00000134250
FAM72B	ENSG00000188610
RP11	ENSG00000236933
HIST2H2BA	ENSG00000223345
HIST2H2BB	ENSG00000241013
SRGAP2P1	ENSG00000171943

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_00001	chr1:120526012-120543041	Adipose_Nuclei
SE_03434	chr1:120532547-120534262	Brain_Angular_Gyrus
SE_03980	chr1:120532676-120538287	Brain_Anterior_Caudate
SE_07385	chr1:120532333-120540526	Brain_Hippocampus_Middle_150
SE_08816	chr1:120533293-120534160	Brain_Mid_Frontal_Lobe
SE_09137	chr1:120527151-120541320	CD14
SE_18945	chr1:120529139-120541401	CD4p_CD25-_Il17-_PMAstim_Th
SE_29608	chr1:120531926-120534326	Fetal_Muscle
SE_45586	chr1:120526078-120541491	Osteoblasts

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I119990

chr1

120533224

120534023

Enhancer Sequence

CAGAATTATT GATAATACTC AAAAAGTAGA AGCAACTCAA ATGTCAATCA ACTGATGATG 60
GATAAATAAA ATGATAAAAT GTGGTAAATC CATATGATAA AATATTATTC AGCCATAAAA 120
AGGCACAGAG TACTGATAAA TGCTACCACA TCAATGAACT TTGAAAACCT CATGCTAAGT 180
GAAAGAAGCT GTCATAAATT ACTACATGCT GCATGTTTCC ATTTGTATGA AATGTCCAGA 240
AGAGGCAAAT AAAGACAGAA AGTAGACTAG TAGTTGCCTA GGGCTGGGAG GGAGTTAGGA 300
GGAATGGAGA GTAATTGATA ATGGGTAAAG GGTTTCTTCT GATGTATAAA AATATTCTAG 360
AATTGACTGT GGTGATGGTT ACTCCTATCT ACTAAAATTA CTGAATTGTG TACTTTTTTA 420
AGAAGTAAAT TGTATGGTAT ATAAATTATA TCTCAAAGCT ATTGTATTAA GGGAAAAAGC 480
ACTAAACACA GTGCCTTACA CATATTAGCT AATATTATTA TTTGTCAGTG GTATTATAGC 540
ACTTGTTAGA GATTGTCTAC TCTAATCCTT TTATGTTACA GATGAGGAAG TTGAGAGCCA 600
CATGGCTGAC TTGACCAAGA TTAAACGGCT AGTAAGTAGG AATAAGTACT GAAACAGAAA 660
CTTTACCCAA TTGCAGTCCA TATGTTTTCT GGGATCCCGG AGTTCCCTTT CAACAATGTA 720
AAATACAAAC TTAGGTCAAA AGTTCCCATG TCTGAGAAGA CTCAAGCCAA ATCAGTTCTC 780
CTCCAAAGTT GACAGGATTT ATGCTTTAAA AATAGAGATA CAGAATTCTC TTTGGAAAGA 840
TCTACCAAAT TCCTGTAAGA AACAGTCTAC CCAAAGTAGG GGAAAGGCTA TATGAAAAGT 900
TACAAGGCAC TTCTTAAAAA TATATCTTAG GTTTTTAGGG AAAGGTAAAC AGACAAGTTT 960
CCAGACCCGT GGGTGGAATG GATGTAGCAG ATTCACTGAG AGGCTCACAG TGCCGTACTA 1020
AAGGGAGTCT ACTGCTTAAA GCCAATTCAC ATCCTTAAAA GGTCAAATGG AGAGAAATTA 1080
AACTTGGGAG AAGCATTTTA AGACTGTGCT GTTACAAAAC CTCGGGCCAC TTAACTGATT 1140
AATCATGGCA ATGAGGGCAG GGACCAGAAA AGAGTCTTTA GAACCTGTCA TCCCCACACA 1200
GAAGAGCAAC TTTCAGGGAA ACACCCTTAT CTTTCCATTT TCAGACCCCG GGAGGTGTGA 1260
GGGTGGAAAG CCTAGGTAGA GAAGAGAGCA GAAAGGAGAT GAGATGACAC AACCAGGATT 1320
CTCCGAAGCT GGGCTTGAAG TCCTCAAGAA AAACTCCCAT GAACAAGGAA 1370