EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS092-01717

Organism

Homo sapiens

Tissue/cell

HFF

Coordinate

chr1:55941720-55943600

Target genes

Number: 3
Name	Ensembl ID

RP11	ENSG00000242396
DHCR24	ENSG00000116133
PCSK9	ENSG00000169174

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF4	MA0039.3	chr1:55942128-55942139	GGAGGGTGTGG	-	6.32
ZNF263	MA0528.1	chr1:55941789-55941810	GGAGGAATGAGGGAAAGGAGA	+	6.04

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I055476

chr1

55942321

55942610

Enhancer Sequence

AGGTGCACCT TCTAGAATTT GATATTTATG TGGGACATAC AGACGTGAAG CCTGTCTTCC 60
CAGAGGAGTG GAGGAATGAG GGAAAGGAGA CTAATATTTA TGAACAATCA TGTGCCAGGC 120
TAAGTAATTG ACCAGCTTTA TCTCATTTAA TGCCCATGGC ACACCTAAGA GGTGGATCTA 180
TTACTATCTC CATTTTAGAG AGGAGGTAAC TGAGCACGGA GAGGTGAAGT AACTTACTCA 240
ATGTCATGGC ACTGGCAAGT GGGGGCAGGT TGGGAAATCT GGTCCATATA CCACAAAGGT 300
CTTCCTTCTG ATCACTCCCT CTATAGAGCT GCCTCACGGG AAGTGTGCAG GTGAAGCTGG 360
GGGACATCCA AAAGAAGACT GAGGAGGCTT GCAGACCTGG GAGGGGAAGG AGGGTGTGGC 420
AGCCCCAGAA CCCTGGGTGT CACTGACCGG TCAGTGTCTG CAAGCTTCCT TCTATTGTCC 480
CCCTGCTGTT TTAGAGCTTT CAATTTTGTG TTCCTTCCCA GCTAAAAATA AGATTTTGTT 540
TGCACACAGG GCAAAGGCCC TGGGGCCCTC CTGAGAAAAT GTGCAGAGGA AACAGGACAT 600
GGGGTGGACA GCAAAGGCAA GAACGTCAAC TCCATAGCTG CAAGAGGCTA GAAGCACGGA 660
GCGGGAAATG GCACTTCCCT TGTGTTTTTA TGTTTAGCTG GGGTTTAATT AATAACCGGC 720
AAACAAGTCT ATAATTAACT TGACTCCCCT TTTGGCCAGC CAAGGGAATA ATAATCATGT 780
TTTTTTTTTT TTTAAGTCCT TGGTGTTGCT GGAAAGATGG GAGGGAAATG GGGCTTTAAG 840
TGCTGCTTGC ACAATAATGA AAGCTCTGCG TAGCCCTCAC TGCTCCCTCT CCCTTGCAAA 900
TTGCATTATT TATACCAGAT GTTGCATTAA AAGAAGAATT ACTATACTTC AGGGCTTAAA 960
TTATATATGC CTGATTTATT GCCTTTTTTC AGTTTTAAAT GCTACCTTGC AGAACCTTGC 1020
TGATAAATGA TAGCTTATTA TTTTTCAGAG TGCTTGGGCT TATGAAGATT TTGAGAGAAG 1080
GAAGGGGTTA ACTCTTTCCA GGCTGGACCA TTTCCCTTCA TCAGACGTGC ACACTTCTGG 1140
TTGTTTTTAT TTTTAATTGC TGAAGTGACA TGCCAAAATC CTGTCTTGGC TCCTTGTACC 1200
TCAACGATAC AGCACAAACT TCTCAGTGTG GCATTCAAGA CCTGCCTCTG ACTTCCCTTT 1260
CTAGCTCCCA TTATTTTCTT TTCCACACGC TCTGCTCCTG AGTCCTAAAT GATCTGGCCC 1320
ATGTCTACCC TACCAGCCTC ATTTTGTGTC CGTCTGCCAC CCCTGCCTTC TTCTAGCCCT 1380
TTGAACATCC AAACTCCTTC CTGTCTTGGG GACTTTGCAC ATACTGTTCC CTCTGCCTGG 1440
AACTCTCTTC TCTCCATCCT TCCTTTGGCT AAGCATCTTC CTTGTTTCAG CATGAATACC 1500
ATTTCTTGAC CCCTAATATT TATTAGATAC TCCTGTCATG GCGCCAAGAA CTTTCTCCTT 1560
CTAGCACTTT CCAGAGTGTA TACTAATTTA TTTATTTGTA TGATTATTTG CCTGGTTCCT 1620
CCACTGCACC ATGAGCACTG TAAGGCCAAG GACTGACCCT GCTTATTCAC CAGAGTAATT 1680
CTGAGCTGCA CGCAGAGCCA GGCATTGAGG CACAGTATTT TCATTGAACA AATGGCTGAG 1740
TGAGCAGCCA AGCTGCTTGG CCTGTCCATT ACACACTGCT CAGCACCCTC CTCTTCATTA 1800
TTTCTGCCTC TGACTTGGGG AATCTGCTCA AGGGCTTGGG CTGGTCCTTA GACTATGAAG 1860
ATGACTTTGC CAGGCACTGA 1880