EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS092-01599

Organism

Homo sapiens

Tissue/cell

HFF

Coordinate

chr1:53508040-53510100

Target genes

Number: 21
Name	Ensembl ID

GPX7	ENSG00000116157
SELRC1	ENSG00000162377
ZYG11B	ENSG00000162378
RP11	ENSG00000228929
ZYG11A	ENSG00000203995
ECHDC2	ENSG00000121310
SCP2	ENSG00000116171
PODN	ENSG00000174348
HIGD1AP11	ENSG00000227644
SLC1A7	ENSG00000162383
CPT2	ENSG00000157184
RP5	ENSG00000236723
C1orf123	ENSG00000162384
MAGOH	ENSG00000162385
LRP8	ENSG00000157193
RP4	ENSG00000225675
GLIS1	ENSG00000174332
TMEM48	ENSG00000058804
YIPF1	ENSG00000058799
HSPB11	ENSG00000081870
RP1	ENSG00000219102

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXC1	MA0032.2	chr1:53509139-53509150	ATGTTTACATA	-	6.32
HNF1A	MA0046.2	chr1:53509006-53509021	TGTTAAACATTAATT	-	6.15
HNF1B	MA0153.2	chr1:53509007-53509020	GTTAAACATTAAT	+	6.04
Nr2f6(var.2)	MA0728.1	chr1:53509948-53509963	TGAACTCCTGACCTC	-	6.22
Twist2	MA0633.1	chr1:53509000-53509010	ACCATATGTT	+	6.02

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I053042

chr1

53508612

53509788

Enhancer Sequence

ATTTTGTTGT TGGTTGATAG CGTTGGTTTG TCATCAAAGA TCAAATGCTG ATGGAAAGCT 60
GTTGAATGAT TTTGGAAAAG CTGTGTTCCC TCCAGATACG TTCTTGCCAT GTTCTTCCCA 120
CATTAGGTGC TGTACCCCAG ACCCCAAGGG ATCTTACCCT GGGGAAGGAT AGTTTCTGCT 180
GAAACTGACA CTTATTGGCA GCCAAGAGTG GTGTTGAAAT ACAGACTTAC CAAGAAAAGC 240
CATCACTGGA AATTGCCAGC TCCTTTTACA TCAACCAACA AATGGCTATT TGTTAGAGAT 300
TAGCTACATT AAAGCATTAA TAACCTGTCC TAGTTTGAAC CGGCATCTTA AGGAGAATTG 360
CTAGTTCATT TGGCATGTAC ATAATGTTAG GGGGTTTGTT TATTGTTAAC AAAGTAAGAT 420
TTACTTAAAT GTATTTTGTA AGAGCTTGGT AATGATTACT GAGATGATTA TATTATGGAT 480
TTTTAGATTT TGTGCATTTT CCATCATCTC TTTTTGCTTC CTGGGTGCCT TTTAGTATCT 540
TCTCCATGAG TTCTGCCTTT CCCTCATCTC CTTTGAAACG ACTCATATAG CATATCTCCA 600
GGAGGCCATC TTTGATTAAT CTAACATAAC ATATTATTCC TTCATTCCTT TATTCTGACC 660
CTTCAGCACC TTGAGTTCTC AACTCTGTCC CTTTATGGGC AGCATGATAC AGAAAGCTTC 720
AGGGTCTCCT ATCCCCAAGG TAAACTAGAA AGAGCATAGC CAAAAGAAAC AGCCAAACCT 780
GGGTTCAGAT CTAGGCTCTG TCACTCAGAG GGTATATACC TTCCCTGAGA GTCCAATGGT 840
CTTATCTAAA TATGATGAGA ATAATTTCTA TCCATAGAAC TGTTGTGGGG ATTAAATGAG 900
ATAAGGAAGA TAGAGCACCT AGTGTAGTAA GTGCTCAGTA AATCATTGTT TCCTCCCCAG 960
ACCATATGTT AAACATTAAT TTTGCTTAGA CACATAGGTT TGTCTCAGCC CCTCAAAAGG 1020
GCTTTGAAAA CTTGGAAACC ATCTGGGATT CATCAAATGC TATGAATCAG TGAAGGTGCA 1080
GTTAAAACTG AGCTGTTGAA TGTTTACATA CTTCCTAAAA CAAAAGGAAG CTGTAGAGCA 1140
TAGGAATTGG GAGTATGAGC TTTGGCAACA GGAATCTGCA TTCAGATGTA GCTCAGCTAC 1200
TTACTAGCTA TGTGGTCTTG GGCAAGTTAT TTGGTCCCTC TGACCCTTAT AGGATTGTTA 1260
TAAAGATCAG ATGAGACCAG ATATGTTGAA GTGTTCAGCA TAGTGAGAGC TCAATAAATG 1320
CTGATATTAT AGCAGCAGCA GTAGCAGATT TTACTTCCTG AAGCCCCCTT TCAATGACCG 1380
AGAGTCCTTT CTTGGACTGT TAGGACCAGG TCCAACTATC TCAGTTTGTT TTTTACCTCG 1440
TGCTCTTTGA TGTTATATAT CTGCAATAGA ACTGGATTTT CTAGGCTGTA AATTTGTTTA 1500
TTTTTTAAGG ATTTAGACCT TTTTTCGAGT ATTAAGAGAA GATTTTCTCA GCAGCTAAGT 1560
TAGGATGACC ATTGAATCTC AGTCTTTTTA GGGGCGATCC CTGAGTTGTA AGACACATAA 1620
TAAAACCTTT TTTTCTATCT TGTTTCAGTG ATTTAATACT ATAGGCATAC TATGCTTTAA 1680
CAGTTTATTC CATCTCTTTT TTTTTTTGAG ATGGAGTCTC ACTCTTGTCA CCCAGGTTGG 1740
AGTGCAATGG CACGAACTTG GCTCACTGCA ACCTCTGCTC CTGGGTTCAA GCGATTCTCC 1800
TGCCTCAGCC TGCCGAGTAG CTGGAATTAC AGGCACCTGC CACCATGCTC GGCTAATTTT 1860
TGTATTTTTA GTAGAGATGG GGTTTCACCA TGTTGGCCAG GCTAGTCTTG AACTCCTGAC 1920
CTCAGGTGAT CCGCCCACCT CAGCCTCCCA AAGTGTTGGG ATTACAGGTG TGAGCCAGCG 1980
CACCCGGCTT CTATTCCGTC TCTTTTATTA AGGCACAGAT TATCTGATTA GCTATTATGA 2040
CATAATTTGA TCATCTTTTG 2060