EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS092-01045

Organism

Homo sapiens

Tissue/cell

HFF

Coordinate

chr1:32296960-32298190

Target genes

Number: 26
Name	Ensembl ID

PUM1	ENSG00000134644
SNRNP40	ENSG00000060688
ZCCHC17	ENSG00000121766
FABP3	ENSG00000121769
SERINC2	ENSG00000168528
RP11	ENSG00000215899
TINAGL1	ENSG00000142910
PEF1	ENSG00000162517
COL16A1	ENSG00000084636
BAI2	ENSG00000121753
AL136115.1	ENSG00000212673
PTP4A2	ENSG00000184007
KHDRBS1	ENSG00000121774
TMEM39B	ENSG00000121775
KPNA6	ENSG00000025800
RP4	ENSG00000250135
TXLNA	ENSG00000084652
CCDC28B	ENSG00000160050
IQCC	ENSG00000160051
EIF3I	ENSG00000084623
TMEM234	ENSG00000160055
MTMR9LP	ENSG00000220785
FAM167B	ENSG00000183615
HDAC1	ENSG00000116478
MARCKSL1	ENSG00000175130
BSDC1	ENSG00000160058

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr1:32297742-32297760	GATTCCTTCCTGCCTGCC	-	6.02
HNF4G	MA0484.1	chr1:32297152-32297167	TGAACTTTGAACCTT	-	7.37
Hnf4a	MA0114.3	chr1:32297150-32297166	ATTGAACTTTGAACCT	-	7.05
Rxra	MA0512.2	chr1:32297152-32297166	TGAACTTTGAACCT	-	6.55

HEDD

Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2
Chromosome	Start	End

chr1	32297334	32297585
chr1	32297056	32297258

Enhancer Sequence

GTACCCCCAT TATTGTGGGG TGGGATATAT CTCCTACCTC CTTGAAGACT TTCCACTCCC 60
CTGATGACAA ACATCAAATG CCGTTGAGAC TCCAATTCAC CCCTCCCTCA CTCACCCCTG 120
CCACTTGCTA CTCCGGACCC TGAGCCCTGG CTGGGCCTCT GGTCCTGGGG ATCTCAGAGC 180
TGCTGGACAC ATTGAACTTT GAACCTTGCC CTTCCCTTCC CTCTGCCCAG CCACTATCAC 240
GCACAAACAA TGCCCTTTCC CCTGGTTGAG TCTGTCTGTC CTCCAGTTCC AGCCTCCAAA 300
AAGCTTTATC ACTTTAGTGC CAAAGCTGCC AACTTCAGTG TATATGAACA AACGTACTTA 360
AAGGACAAAA CAAAACAAAA AGACCTGCCT CTCTATTGCC TTTGAAACCT ACCTTATCTT 420
CTTCACTCCC ACACTTTAGA TAAATGTCCA TTTGCCTGCA ACTGTTTTTA TCACACACCC 480
TCTCATTGGC CAGGGTAGTG TCATGGTCTC TGGAATCCTC CAGACTCTGA TTCCAATCCC 540
GGTGACCCTA GGCAGTGAGT TGATCCCTCA AAGCCTCACT TTTAGTCATC TGTAAAAGAG 600
AGTCAGTAAT AGCCTCCAAA TAGCTCACAC TGATTCATCA CCACTGTTGA TGTCAGGGGA 660
TAACTTATGA AAAGTACCTA ATATCCTTTG CCTGCCAGGC CCTTCCTTCC TCCATCTGGG 720
GAATCCAAGG TCTGGGTTTC AGTCTCCATG AAACCTTTCC CAACCAACCG GCTGGAGCGA 780
GTGATTCCTT CCTGCCTGCC TGCACCTCCC TAGTACTTCG AGCGATTATT TGCTGACTCT 840
CAGCTCCATC CCACCCCACC TCCAAACAGG CTGCCCAATG GTCAGAGTCA TGCTGCATTA 900
GAGCCAGGGG GTTAGGAAGA AAGGTCATGG ACTTGGACTT GGACATCACA CTTCAGTGTG 960
ATCTGCATTG GGACTGTGGC TCTGCACCTC AGCTGCTTGG CCTTAGCAAG TCCCCTAACC 1020
TCTTTGAGCT TCCTTTTCCT TATTTATAAA ATTGTGATAA CAGTAGTTAT TTTATACGAA 1080
TGCTGTGGAG ATTTAAGTAC ATAATCCATG TCAAGCATTT CACATAATGC CCAGCACTCA 1140
GAAAGTGCTT AATAAACGGT CCCTTCCTCT CTTCTTAATA TCAGGCAGAC TGCTCTGCCA 1200
GGCTCCGTTT ATTGATGGAT TCAAGGTTAA 1230