EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS092-00920

Organism

Homo sapiens

Tissue/cell

HFF

Coordinate

chr1:28700060-28701450

Target genes

Number: 23
Name	Ensembl ID

STX12	ENSG00000117758
PPP1R8	ENSG00000117751
RPA2	ENSG00000117748
XKR8	ENSG00000158156
RP11	ENSG00000238231
EYA3	ENSG00000158161
RP5	ENSG00000228589
DNAJC8	ENSG00000126698
ATPIF1	ENSG00000130770
SESN2	ENSG00000130766
MED18	ENSG00000130772
PHACTR4	ENSG00000204138
RCC1	ENSG00000180198
SNHG3	ENSG00000242125
SNORA73A	ENSG00000201808
SNORA73B	ENSG00000200087
TRNAU1AP	ENSG00000180098
SNHG12	ENSG00000197989
RAB42	ENSG00000188060
TAF12	ENSG00000120656
GMEB1	ENSG00000162419
YTHDF2	ENSG00000198492
RP4	ENSG00000225616

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOSL1	MA0477.1	chr1:28700215-28700226	CATGAGTCACC	-	6.62
JUND	MA0491.1	chr1:28700215-28700226	CATGAGTCACC	-	6.02
NFAT5	MA0606.1	chr1:28700513-28700523	AATGGAAAAT	-	6.02
NFATC1	MA0624.1	chr1:28700513-28700523	AATGGAAAAT	-	6.02
NFATC3	MA0625.1	chr1:28700513-28700523	AATGGAAAAT	-	6.02

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I028373

chr1

28700148

28701598

Enhancer Sequence

AAAGTTCTGG GATTACAGGC GTCAGCCATC ACGCCTGGCC CATAATTTTA TAATTTTTAT 60
AGAGACAGGT CTCGCCATGT TGCCCAGCCT GGTCTCAAAT TCCTTGGCTC AGGCGATCCT 120
CTCACCTCAG CCTCCCAAAG TGCTGGGATT ACAGGCATGA GTCACCATGC CCGGCCTCCC 180
AGTACCATTT TTTAAACAAA TTAATACACA TTGTGTCATT TAATCCTCAC TACAGTTCTG 240
TGAGATGGTT GTTACTCTCA TTTTACAGCT GATAAAGCCT AGCCTCTAAA ATGTTGAAGT 300
GACTTGCCCA AGGTTATAGT TAACCCAGGT AGGAAATATC AGAGTAAACC ATACTTCAAA 360
TCTAGTCCTC TTTCAGTTAC CTCACACTTA TTACAGCTAC TAATCTTAGC AGCACCAACA 420
GCTTTAATTT GCTAAAATCT AAATATTGGA GAAAATGGAA AATATTTTCC AATTAAGGCA 480
AATTGATTTA CAAGGAACTG GAATTTCTGG AACCATAAAC AATGAGTCTT TCTCTTAAAT 540
TATATTGAAC ATTGGTCCCA TTACTTTGTC TTCTCATATG CTGTGATTAC CTTGTGCCTA 600
GGCAGAATGG CAGTTTTATG CAACGCTCAA AAAGTGGTGA GTTACTCAGT TTTGGTTCCC 660
CCTAATCTTT GCTATAAGGT TTATTAAATA TGTTGGAGAA CATAAATACA ATAGCTTTGG 720
CTGCTGAAAC TAACATTGAA GACAGAACCA AAATTAAGAT ACTGTACTTT TTTAGTCAGA 780
CCATCGGGAC TCAAGAGAAT GCTCTCTCTA GTTTCTGCTT TTAATAAAAA CTTTTAATCA 840
GTTTCAAACC TGCAGTTAAG TCTTGGATTT ATGTTAGTAC ATGCCATGAA TGTGACATCA 900
GAAACAGAAA CCTATTTCAC CTCCCTTACT TATTAGGTAA AATGCATAAC ATGCCAATGG 960
AATTGAGTCA ATACAATTAT GTAGTCTAGC CTTTCTAACT GGTAGTAGCC TGTTTGAAAT 1020
CTTTTATTAT TGCATTATAA TGGGAAAGAA CTTTTTTTCC TTGTGCTTTT GCTGTTGGTT 1080
TACTTCATTT CCAAAACCAT CTGTTCATTC AGTCAACAAA TACGGAAAGT CTGTTATATT 1140
CTAGGCACTG TTGTAGACAT TGAGGACAAA ACAGTGAAAA CAAGTATTTT CCCTCTTGGG 1200
GTTTACCTAC TGATTAGGGT TGGCTGGGAA GAGGAAGGAG TCTGACAGTA AATAAGCACT 1260
AAATAAATAA AATTCCCTCA TATAACTGCA ACCTTGAGCA ACTCAACCTC TTTGAGCTTT 1320
AGTTTTCTTG TCTTTAACAT GGATGTAATT GATTCCTGCT CTTCCTATCT TGTGGATTGT 1380
TTCTAAGAGG 1390