EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS092-00765

Organism

Homo sapiens

Tissue/cell

HFF

Coordinate

chr1:25061210-25061750

Target genes

Number: 13
Name	Ensembl ID

RP5	ENSG00000236810
GALE	ENSG00000117308
HMGCL	ENSG00000117305
RP11	ENSG00000229106
SRSF10	ENSG00000188529
NIPAL3	ENSG00000001461
C1orf201	ENSG00000001460
RCAN3	ENSG00000117602
SRRM1	ENSG00000133226
CLIC4	ENSG00000169504
RUNX3	ENSG00000020633
SYF2	ENSG00000117614
TMEM50A	ENSG00000183726

dbSUPER

Number of super-enhancer constituents: 7
ID	Coordinate	Tissue/cell

SE_04517	chr1:25061537-25063279	Brain_Anterior_Caudate
SE_05379	chr1:25061458-25063276	Brain_Cingulate_Gyrus
SE_06312	chr1:25061465-25063570	Brain_Hippocampus_Middle
SE_07165	chr1:25061564-25063307	Brain_Hippocampus_Middle_150
SE_08484	chr1:25061365-25063339	Brain_Inferior_Temporal_Lobe
SE_37045	chr1:25061548-25063114	HSMMtube
SE_41323	chr1:25061563-25063416	Left_Ventricle

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I024735

chr1

25061521

25063630

Enhancer Sequence

TATAAGCCAC TATGCCAGCC TGTTTTTTGA GAGAGGTTCT CTGTCACTCA GGCTGGAGTG 60
CAGTGACACA GCCACGGCTC ACTGCAGTCT TGACTTTCTA GGCTCGAGTG ATCCTCCCAC 120
CACAGTCTCC CAATTATCTG GCACTACAGG TGTGCACCAC CATACCCAGC TAATTTTTAT 180
TTTATTTTAT TTTATTTATT TTTATTTTTT TTGAGGCAGG GTCTCACTCT GTCACCCAGG 240
CAGGAGTGCA GTGGCATGAT CACAGCTCAC TGCAGCCTCA ACCTCCTGAA CTCAAGTGAT 300
TCTCCCACCT CAGCCTGCTG AGTAGCTAGG ACTACAGGCA TGCACCACCA CACCTAATTT 360
TTGTATTTTT TGTAGAGATG GGGTTTTGCC ATGTTACCCG GACTGGTCTC AAACTCCTGG 420
GCTCAAGTGA TCCACCTGCC TTGGCCTCCC AAAGTGTTGG GATTGCAGGC GTGAGCCACT 480
ACATCCAGCC CTAATATTTT ATTAGTATTT GTAGAGACGG ATCGTTATGT TGCTGGGACT 540