| Tag | Content |
|---|
EnhancerAtlas ID | HS091-33509 |
Organism | Homo sapiens |
Tissue/cell | HepG2 |
Coordinate | chr3:4752920-4753440 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr3:4753241-4753260 | TTACCAGCAGGTGTCACTA | + | 6.67 | | GFI1 | MA0038.2 | chr3:4753232-4753244 | TGCTGTGATTTA | - | 6.27 | | Gfi1b | MA0483.1 | chr3:4753232-4753243 | TGCTGTGATTT | - | 6.62 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_04502 | chr3:4752935-4754236 | Brain_Anterior_Caudate | | SE_27942 | chr3:4753013-4756723 | Fetal_Intestine | | SE_28801 | chr3:4752968-4757254 | Fetal_Intestine_Large | | SE_33812 | chr3:4753163-4754478 | HCC1954 | | SE_56189 | chr3:4752764-4755171 | u87 | | SE_67656 | chr3:4752764-4755171 | u87 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH03I004711 | chr3 | 4752946 | 4756476 |
|
Enhancer Sequence | AGATTTTTAC CCTAAGATTA GTTGTTTGTT TAGCTTGGGG CTGGACTCTG CATGTGAGTT 60
TCTTACTTTT CTGGGCCCCT CTAAGGACAA GCTTGTGCAT AAGGGAACTG TGTGTATTGG 120
CCTCAACCAT CATCCTCATG AGTTGTTTTT GTTTTACAGT GTTGGCATAT TTGACCCATT 180
TTACTGGCAA TTCTCAGTGG ATAAATAGCC ACGCTTTATA AACGAGCAGG TCTGAGTGGA 240
CCTCTGTCTC GGTTCTCCTC TCCATATAAT CTCTCCATTG TATGTGGCTG ACTCCTGCCC 300
AGTGAGCCTG TTTGCTGTGA TTTACCAGCA GGTGTCACTA TTGAGACACA GTTGCTAACT 360
GGCTGTTCTC AGTGCAGGGA ATGCCCTGAA GTATCTTTAA CCTGAGAGCT CTTAATAAAT 420
ATTTGTTCAT TAACGGACTA GTTAAAATAA ATTGCTTGTG AAGTCTTTTT AATTTAAAAT 480
TAGCTTCAAG GAAGTAATCC GTGGTTTTCC CCCCATTCAG 520
|
