EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS091-31165

Organism

Homo sapiens

Tissue/cell

HepG2

Coordinate

chr20:44533760-44534900

Target genes

Number: 28
Name	Ensembl ID

SDC4	ENSG00000124145
SYS1	ENSG00000204070
DBNDD2	ENSG00000244274
PIGT	ENSG00000124155
RPS2P7	ENSG00000235508
HNRNPA1P3	ENSG00000226188
WFDC3	ENSG00000124116
DNTTIP1	ENSG00000101457
UBE2C	ENSG00000175063
TNNC2	ENSG00000101470
SNX21	ENSG00000124104
ACOT8	ENSG00000101473
ZSWIM3	ENSG00000132801
ZSWIM1	ENSG00000168612
SPATA25	ENSG00000149634
CTSA	ENSG00000064601
NEURL2	ENSG00000124257
PLTP	ENSG00000100979
PCIF1	ENSG00000100982
ZNF335	ENSG00000198026
FTLP1	ENSG00000235525
MMP9	ENSG00000100985
SLC12A5	ENSG00000124140
RP11	ENSG00000240742
NCOA5	ENSG00000124160
RPL13P2	ENSG00000213820
CD40	ENSG00000101017
SLC35C2	ENSG00000080189

SNPs

Number: 1
ID	Chromosome	Position	Genome Version

rs6065904

chr20

44534651

hg19

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CREB1	MA0018.3	chr20:44534471-44534483	AGTGACGTCACC	+	6.22
CREB1	MA0018.3	chr20:44534471-44534483	AGTGACGTCACC	-	6.22
FOXP1	MA0481.2	chr20:44534038-44534050	TACTGTTTACAT	-	6.11

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH20I045904

chr20

44533162

44535214

Enhancer Sequence

GGGTGGGGCA TTCACAGTCA GGGTCAAGGC AGACTGGCCT GGCACCTGGA CTGACAGCAG 60
GTGTCTCCCA GCCCCGTGCT AGGCACTGTG GGGGGATGGT GGGAACCCAG CTGCTGTTCT 120
TGGAGGATTC ACAAGCACAT CTCTTAAAAG GCATTGGAAG GAGGACACCT GCTACCAGGG 180
GGCGAGCCCG TCAGACTGGA GGAGGGAGGG TCAGGAAAGG TTTCAGGGAA GAGGTGACAT 240
CTGAGTGGGC CTTGAAAGCT AGAGGCAGTA ACAACAGCTA CTGTTTACAT ATATTGTGCA 300
TACTCATGCT TCTTTGCCAA GTACTCTAAG CTCTTCACAT AGATCGACTT CTTTAATCTG 360
CATAACAACG TGTGTTTTCT TACTAGATTA TTTCCATTTA CATGTTAGGA AACTGGCCAA 420
CTGAAAACTT ATGCTTAGGG CCGTGCAGCT AGTCAGTGGC AGAGCTAGGA TTTGAACTTC 480
AGGCATTCTT TTTCTCTTTG TAGAGAAGGA GGTCTCACTA TGATGCCCAA GCTGGTCTCA 540
AACTCCTGGG CTCAAGCGAT CCTCTCGCCT GGGCCTCCCA AAGTATTGGG ATTACAGGCA 600
TGAGCCACTG CACCCGACTG ATTCTAGCTC CCGAGTCTGC ACTCTGAAAC TGCTATACTC 660
CTCTGGGAGA CCAAAGGTAG TGGCTACACA CTGGCTATGT GGCCTTGGGC AAGTGACGTC 720
ACCTCTATGA GTAAGTCTCC ACATTCCTAA AATTAGGATG ATGTTAGTAC CTGACTCACA 780
GGGTTGTGAG AGAATGAAAT GAGATTATTT GTATAGAAAT TTATGTCCAG CTCCTTCGGG 840
GGAGTTGGGG AAAGGCCGTG CATGAGCAAA GGCCCTGAGG TGGGAAGCCA GGGTCCAATT 900
TGGGAAAGAG CAGCTGCAAA GAAACAGGAT GAGATATAAA AGGTGGGGCC AGGTAAGATT 960
AACAGGGGCT CAAATGCCAG ACCCAGGAGG CTGAACCTAA TTCTGTAGTA ACAGGGAGCC 1020
ATAGCATTCT CAGTAATGGG AGTGGCCTCA TCAGAGCTGT GCTTTAAGAA GTAAAATCTT 1080
GCAACTTAGC AGAGAAAGAG GTCTTGTTAG GAAGTCAGAG GTCATACACC AGCCCAAGCA 1140