EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS091-30738

Organism

Homo sapiens

Tissue/cell

HepG2

Coordinate

chr20:34280480-34282230

Target genes

Number: 35
Name	Ensembl ID

ACSS2	ENSG00000131069
TRPC4AP	ENSG00000100991
MT1P3	ENSG00000229230
EDEM2	ENSG00000088298
RP4	ENSG00000261582
EIF6	ENSG00000242372
FAM83C	ENSG00000235214
UQCC	ENSG00000101019
GDF5OS	ENSG00000204183
GDF5	ENSG00000125965
CEP250	ENSG00000126001
RP3	ENSG00000230155
C20orf173	ENSG00000125975
ERGIC3	ENSG00000125991
RPL36P4	ENSG00000224497
RPL37P1	ENSG00000227401
FER1L4	ENSG00000088340
SPAG4	ENSG00000061656
7SK	ENSG00000222460
RBM12	ENSG00000244462
CPNE1	ENSG00000214078
ROMO1	ENSG00000125995
NFS1	ENSG00000244005
RBM39	ENSG00000131051
BXDC1P	ENSG00000225357
PHF20	ENSG00000025293
COX7BP2	ENSG00000234274
Y	ENSG00000199676
HIGD1AP16	ENSG00000219608
SCAND1	ENSG00000171222
C20orf152	ENSG00000149646
HMGB3P2	ENSG00000231470
EPB41L1	ENSG00000088367
C20orf4	ENSG00000131043
DLGAP4	ENSG00000080845

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MEF2A	MA0052.3	chr20:34281718-34281730	ACTAAAAATAGA	+	6.27
MEF2B	MA0660.1	chr20:34281718-34281730	ACTAAAAATAGA	+	6.32
MEF2C	MA0497.1	chr20:34281716-34281731	CTACTAAAAATAGAA	+	6.57

Enhancer Sequence

TTAGCCTGGC GTGGTGGTAC ACATCTGTAG TCCCAGCTAC TCAGGAGGAT CACCTGAGCC 60
AAGGAGGTCA AGGCTGCAGT GAGCTGAGAT CTGGCTACTG CACTCCAGCC TAGGTGAGAT 120
CAAGACTCTG TCTCAAAAAA CAGAAAAAAG AAAAAAAAAT GGGCCAGGAG CAGTGGTTCA 180
CACCTGTAAT CCCAGCACTT TGGGAGACTG AGGCAGGTGG ATCACCTGAG GTCAGAAGTT 240
TGAGACCAGC CTAGTCAACA TGGCGAAACC CCGTCTCTAC TAAAAATACA AAAATTAGCT 300
GGGTGTGGTA GCAGGCTCCT GTAATCCCAG CTACTCAGGA AGATGAGGCA GGAGAATCGC 360
TTGAACCCTG GAGGCAGAAG TTGTAGTAAG CCAAGATTAC GGCACTGCAC TCCAGCCTGG 420
GTGACACAGC AAGACTCCCC CTTGGGAAAA AAAAAAAGAA TTAACAGTAT CAACTTTGCA 480
GAACAGGATC AGGGACTGGG GTCCTTGGGG AAGGAGAGGA AGATTTACAC TTCATTTTAT 540
TTTATTTTTG TTTATTTATT TTTTGAGACG GTCTCATTCT GTCACCCAGG CTGGAGTGCA 600
GTGGTGTGGT CTCGGCCCAC TGCAACCTCT GCCTCCCGAG TTCAAGCAAT TCTCTTGTCT 660
CAGCCTCCCG AGTAGCTGGG ACTACAGCCA CCACACCCAG CTAATTTTTT GTATTTTTTA 720
GTAGAGATGG TGTTTCACCA TTTTGCCCAG GATGGTCTCG AACTCCTGAG CTCAGACAAC 780
CTGCCTGCCT CGGCCTCCCA ATGTGCTAAG ATCACAGGCT TGACCCACTG CACCCGGCCT 840
ACACTTCATT TTAAATCTTT CCATTGGTTT TAAAAAAACA CACCATATGT GACAGAATTA 900
TTTTTCAAAA ATTAAAAACT TGGAAAGAAA ATGTGCATCT CTCCCCAGAG CTTATAAAAG 960
ACTATTACCT TTAACAGCAG AATAAAAAGC CAGGTGCAGT GGCTCAAGCC AGTAATCCCA 1020
GAACTTTGGG AGGCAAAGGC AGGAGGATCA CATGAGCCCA GGAGTTCAAG ACCAGCCTGG 1080
GCAACATAAT GAGAGCCGCA TCTCTACAAA AATTAAAATA ACAGGCCGGG CGCGGTGGTT 1140
CACACCTGTA AAACCAGCAC TTCGGTTGGC CAAGGCAGGC GGATCACAAG GTCAGGAGAT 1200
CGAGACCATC TTGGCTAACA TGGTGAAACC CCATCTCTAC TAAAAATAGA AAAATTAGCC 1260
AGGCGTGGTG GTGGGAGCCT GTAGTCCTAC CTACTCAGGA GGCTGAGGCA GGAGAATGGC 1320
GTGAACCCAG GAGGCAGAGC TTGCAGTGAG CTGAGATCAC GCCACTGCAC TCCAGCCTGG 1380
GCGACAGAGC CAGGCTCCAT CTCAAAAAAA AATAAATAAA TAAATTAAAA TAACAAAATT 1440
AGACAGGCGT GCTAGTACAC GCCTGTAAGC CTAGCTACTT GGGAGGCTAA GATGAGAGGA 1500
TTGCTTGAGT CCAGGAGTTC AAGGCTCCAG TGAGCTGTGA TTGTGCAACT GCACCCCAGC 1560
CTAGGTGACA GAATGAGACC ATGTCTTTTT TTTTTTTTTT TTTGAGACAG AGTTTCGCCC 1620
TTGTTGCTAC AGTGCAATGG CGCAATCTCG GCCCACTGCA ACTGCAACCT CTGCCTCCTG 1680
GGTTCAACTG ATTCTCCTGC CTCAGCCTTC CAAGTAGCTA GGACTACAGG GGTGTGCCAC 1740
CACACCCAGG 1750