EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS091-30724

Organism

Homo sapiens

Tissue/cell

HepG2

Coordinate

chr20:34192540-34194040

Target genes

Number: 35
Name	Ensembl ID

GSS	ENSG00000100983
TRPC4AP	ENSG00000100991
PROCR	ENSG00000101000
MT1P3	ENSG00000229230
MMP24	ENSG00000125966
EDEM2	ENSG00000088298
RP4	ENSG00000261582
EIF6	ENSG00000242372
FAM83C	ENSG00000235214
UQCC	ENSG00000101019
GDF5OS	ENSG00000204183
GDF5	ENSG00000125965
CEP250	ENSG00000126001
RP3	ENSG00000230155
C20orf173	ENSG00000125975
ERGIC3	ENSG00000125991
RPL36P4	ENSG00000224497
RPL37P1	ENSG00000227401
FER1L4	ENSG00000088340
SPAG4	ENSG00000061656
7SK	ENSG00000222460
RBM12	ENSG00000244462
CPNE1	ENSG00000214078
ROMO1	ENSG00000125995
NFS1	ENSG00000244005
RBM39	ENSG00000131051
BXDC1P	ENSG00000225357
PHF20	ENSG00000025293
COX7BP2	ENSG00000234274
Y	ENSG00000199676
HIGD1AP16	ENSG00000219608
SCAND1	ENSG00000171222
C20orf152	ENSG00000149646
EPB41L1	ENSG00000088367
C20orf4	ENSG00000131043

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr20:34193284-34193296	GAATATTTGTTT	+	6.18
IRF1	MA0050.2	chr20:34192756-34192777	TTTTTCTTTCTTTTTTTTTTT	+	6.59
PLAG1	MA0163.1	chr20:34192561-34192575	TCCCCTAGGGCCCC	-	6.8

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH20I035604

chr20

34192461

34192610

Enhancer Sequence

GATCTGAAAC CAGATACAGT ATCCCCTAGG GCCCCCCATC TAACTGCCCT GGGTCTAAGA 60
GAGGCCCAAG GACAATGCCA GTGCCTTTTA CTACAGGCGG CAGAGATCTT TCTGGCCAGC 120
ATCCGTGGTG CCTTGTGGTT CCTCTCTGAT CATTAATAAT GTAGACTACT CATAACCTAT 180
TAAGAACTAA GTAACTAGGC AAGTTTCCTC GTTATTTTTT TCTTTCTTTT TTTTTTTTTT 240
TTTTTTTTTT TTTTTAGTAT TGATGAGGTC TTATTATGTA CCTTGCCCAG GTTGGTCTTG 300
AGCTCCTGAG CTCAAATGAT CCTTCTGCTT TAGCTTCCCA AAGTGCTGGG ATTACAGGCA 360
TGAGCCATTG TGCCCAGCCG CAAGTTACCT CTTGAGGCCC AACAGGATTC CAAAATTGTC 420
TCATTTTTGT TGGAAATCCC TTACGGTGGC CTTCACTACT CTGCCTGGTC TGGCCCCACC 480
AACCTTTCCA GCTCCATCTC ACTCCAGGCA CCCCAGCTGT GCTCCTTCAA GGCGCTGGAC 540
TTTTGCATAT GCCTTTTCCT CTGCCTGGAA CATTCTCTCC TCCCAGTTAA CATCTGTTAT 600
CCTTCAAGTC TAAGTTCAGG TACTATTTCC TCAGGGAACC TTCTCTGGCC CCCAAGTAGA 660
TCATACTCCC CTGTGGTACC CTCTCCCAGC CCCTACCAGC TTTCTTCTAA CACCTGCCAG 720
TTCCAGTTTC ACACTTACTT GTGTGAATAT TTGTTTAATG TTTGCCTCCC TTCCAAGGGT 780
GTGAATCTTT ATCTGGTTTT GCTCACCACG GAATCCTCAT TGCTCAGCTC AGCATTTGGC 840
TTATCATAAG AGCTCAACAA ATGATGACGG ACTGAACAAA AGAACTCCAC ATTATATAAA 900
TGAGAAAATA GCTTCCAGGC CAGGTGCGGT GGCTCATGCC TGTAATCCCA GCACTTTGGG 960
AGGCCGAGGG TAGATCACAA GGTTAGGAGT TCGAGACCAA CCTGGCCAAG ATGGTGAAAC 1020
CCAGTTTCTC CTGAAAATAA AAAAATTAGC TGGGTGTGGT GGCGGGCGCC TGTAGTCCCA 1080
GCTACTTGGG AGGCTGAGGC AGGAGAATCA CTTAAACCTG GGAGGTGGAG GTTGCACTGA 1140
GCCGAGATTG AGCCACTGCA TTCCAGCCTG GGTGACAGAG CAAGATTCCG TCTCAAAACA 1200
ACAACAAAAA AAGAAAACAG CTACCAAATG CTAAAGAACG TGTACAAGTT CCCAGACGGG 1260
AAATGGCAGA TCTGAGATTT GAAGTTAGGT CCATGTCTAC TAGGCTATGA GCCCTTCCAT 1320
GAAACACCAG GAAAATCCAG CCAGGTTCAT CTTTGTCTCC CAAAAGAATT GATTGCTGAA 1380
AGGAATCCTG GCTGGAGGCC TTGTTACCAC TCCTCTCTGG GTCTTAGGTT TTCCCCTGTG 1440
AGAAATGGAA CCCTTTATCT AGAGGTACTT AAGGGTGGCA GCCTGGGGGC CAGAGGGGCT 1500