EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS091-30718

Organism

Homo sapiens

Tissue/cell

HepG2

Coordinate

chr20:34148410-34149610

Target genes

Number: 34
Name	Ensembl ID

GSS	ENSG00000100983
TRPC4AP	ENSG00000100991
PROCR	ENSG00000101000
MT1P3	ENSG00000229230
MMP24	ENSG00000125966
EDEM2	ENSG00000088298
RP4	ENSG00000261582
EIF6	ENSG00000242372
FAM83C	ENSG00000235214
UQCC	ENSG00000101019
GDF5OS	ENSG00000204183
GDF5	ENSG00000125965
CEP250	ENSG00000126001
RP3	ENSG00000230155
C20orf173	ENSG00000125975
ERGIC3	ENSG00000125991
RPL36P4	ENSG00000224497
RPL37P1	ENSG00000227401
FER1L4	ENSG00000088340
SPAG4	ENSG00000061656
7SK	ENSG00000222460
RBM12	ENSG00000244462
CPNE1	ENSG00000214078
ROMO1	ENSG00000125995
NFS1	ENSG00000244005
RBM39	ENSG00000131051
BXDC1P	ENSG00000225357
PHF20	ENSG00000025293
COX7BP2	ENSG00000234274
Y	ENSG00000199676
HIGD1AP16	ENSG00000219608
SCAND1	ENSG00000171222
EPB41L1	ENSG00000088367
C20orf4	ENSG00000131043

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr20:34148960-34148980	CCCCACCCCAACCACCCCTC	+	6.43
RREB1	MA0073.1	chr20:34148964-34148984	ACCCCAACCACCCCTCCCCA	+	7.33
ZNF263	MA0528.1	chr20:34148761-34148782	GGAGAAGAGGGAGGATGAGAG	+	6.17

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH20I035561

chr20

34148967

34149401

Enhancer Sequence

GGGCACATTA GGGGGTGGCT TCAGACTCTC GAGTGGGGCC CTAAAAGGGG CTGCAGGAAG 60
CAGGAGGGAC CTGGGCCGGG GCCACTGACA TTCACTGGAC ACCTGTGTGC CCAGCAGGGG 120
AATCCAATGC CTGTGGTCCC ATGAAGGGAA GCCCCAGGTG TCACTGACCA CCCTGGCCAC 180
AGCAGATGGC CCCAGGAATG GTCTGTGGGG CCAGCGAGGT TCTCCTTCCC GTGAATTTAG 240
AATCAGGGCG CTGCACTGTT GCATGGTGTG GCATCAGATG CAAAGCTGGA GCTACCACAA 300
GCCAGAGTTT GGGGATGTAG AAAAGTGAGT GAACAGAAAG CCAGTCTGCA GGGAGAAGAG 360
GGAGGATGAG AGATGGGGGA CAGGAGCATA CAGCGCCTGA GGGACAGGAG GGCTGCGACA 420
CTCTGGACCC TACCCGCATA TAGCCCTGTC TTTGGGGGCC ATGGGGTTGC CTGGATAGCT 480
GTTTTCTCCA GCCCAGCATC AATTTCCCCT CATTTGTTGA CAGCACCGTG ATTTTCTGCT 540
GGTGACCCAC CCCCACCCCA ACCACCCCTC CCCACCACCA CTGTCAATCT ATGGAATTCT 600
GGTGGGGCAG GCCCCTCCCT CCCTGGCTGG ACGGGGTCGG GGAGACATCA CTGGACTGGC 660
CAATTCGAGT ATTACAGCCC CCTAACCACA ATGATTGGTT CTTCAGGGCA CAGCATTTGA 720
CCCAAGCTGG TCGGCTGAGT CAGCCCTGAG GCTTTTGCTG TAACTGGGAA AGAGGTGTTT 780
GTTTCTGCTC AAGTGGCCTG GCTGAGATGT AAGCCTCGCA CTGTTAGATG CCACTTTGCC 840
CCCAGCCCTG CAGAGGGCTC CCTGAGAGCG ACACCAAGGA AAGCAGAGCC CAGAGGCAGA 900
AAGTGACAGG CTGCTGATAT CCGAGCATCT GCATTCAGCC CTGTGTGAAG TGGCTGTGAC 960
CCACACACAA CTCCACTCAG ATGAGCTTAG GTGGGAAGGG GGCTTACCAA AAGGTACTTG 1020
GACTCAATTT ACAAGAGACA CTCAACTTGC AATGCTTTTG AATAACAGGG AATTTAATGA 1080
CACCTAACTG AAAAGCCTGT GATGAGCAAC CTCTGCCTGC TTCACTGGGG ACCCGGGTTT 1140
TCAGAGGAGC CTTGTACAGG TAGACCAGGA TGTGCACCCG CCTTGGGAGG AGGCGACAGA 1200