EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS091-30707

Organism

Homo sapiens

Tissue/cell

HepG2

Coordinate

chr20:34051460-34053560

Target genes

Number: 36
Name	Ensembl ID

GSS	ENSG00000100983
TRPC4AP	ENSG00000100991
PROCR	ENSG00000101000
MT1P3	ENSG00000229230
MMP24	ENSG00000125966
EDEM2	ENSG00000088298
RP4	ENSG00000261582
EIF6	ENSG00000242372
FAM83C	ENSG00000235214
UQCC	ENSG00000101019
GDF5OS	ENSG00000204183
GDF5	ENSG00000125965
CEP250	ENSG00000126001
RP3	ENSG00000230155
C20orf173	ENSG00000125975
ERGIC3	ENSG00000125991
RPL36P4	ENSG00000224497
RPL37P1	ENSG00000227401
FER1L4	ENSG00000088340
SPAG4	ENSG00000061656
7SK	ENSG00000222460
RBM12	ENSG00000244462
CPNE1	ENSG00000214078
ROMO1	ENSG00000125995
NFS1	ENSG00000244005
RBM39	ENSG00000131051
BXDC1P	ENSG00000225357
PHF20	ENSG00000025293
COX7BP2	ENSG00000234274
Y	ENSG00000199676
HIGD1AP16	ENSG00000219608
SCAND1	ENSG00000171222
C20orf152	ENSG00000149646
EPB41L1	ENSG00000088367
C20orf4	ENSG00000131043
DLGAP4	ENSG00000080845

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOSL1	MA0477.1	chr20:34052199-34052210	CATGAGTCACT	-	6.14
GFI1	MA0038.2	chr20:34053421-34053433	TGCAGTGATTGA	-	6.18
IRF1	MA0050.2	chr20:34053255-34053276	AAAAAAAAAATGAAAGAAGTT	-	6.47
ZBTB18	MA0698.1	chr20:34052289-34052302	CAACATCTGGCTA	-	6.1

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH20I035463	chr20	34051641	34051810
GH20I035465	chr20	34053302	34056492

Enhancer Sequence

GTGAGGCTGA GCTCTCTGCA CCCCCTGGGT CCTCAGTGAA TATACTTGTT AGGTTTCATT 60
TGTTGACTGA GGGAGGTTGG AGTGTACAAG TGAGGTGTTT GGTGGAAGGC TCTCTTTCTC 120
AGCCTCTGAG AGGTTTATCA CACTGATATC TTCATTGGAC CTAGCTGGCC TGTCAGATTC 180
CAACCCTTGG TTTTCAAAGG ACGAAATGTA AATTAGATTG GAAGGAGTGT GGGATTAGCA 240
GGAAGAAGTG CATGTTTCCT CCAGCAGGTG TCAGTGTTTC TTTTAGAAAG ATGCAGGCCT 300
TTGCGAGCCT ACAGCATGTC TGCAGCAAAG GGATGTCTGT GCTATTAGAA CTGGCTTTGA 360
AAAACCCATT TATTTGCCTT TGTTCCAGCT GCCTCTCAGT ACCTCCTCAC ATTTTCCTCA 420
GAAAAGTTCT CTCAGAGGAA GGAAAGAACC AAAACTTATT GAGCACCCTC AATGCAGTCC 480
AGGCAGCATG AGGCACTGTC ATATACAGAT GGTCCTCCCC AACTTAGGAT GGTTGCAAGT 540
TTTCAACTTT ATGATGATGT GAAAGCTATA TGCATTCAGT ATGTTCCTTG GGTTATGATG 600
GGGTTACAGC TGGATAAACC CATTGTTTGG GGTTGTTTTG CTTGCTTGTT TGGTTGGTTT 660
TTGTTTGTTT GGTTGGTTGG TTGTTTTGAG ACAGGGTCCT ACTTACTCTG TCGCCCAGGC 720
TGGAGTGGAC TGGTGCAGTC ATGAGTCACT GCAGCCTCAG CCTCCTGGGC TTAAGCGATC 780
ATCCCACCTC AGCCTCCCAA AAAGTAGCTG GGGCTACAGA TACATGCCTC AACATCTGGC 840
TAATTTTCTT TATTTTCTGT AGACACAGGG TCTCTCTATG TTGCCCAGGC TGGTCTCAAA 900
TTCTTAGACT CAAGCAATCC TCCCACTGCT GGGATTACAA GTGTGAGCCA CTGCATCTGG 960
CCCGAACTCA CTGTTAAGTT GAAAATATCA TAAGTTGAAA ATGTCAGCCA GGCGCAGTGG 1020
CTCATGCCTG TAATCCCAGC ACTTTGGGAG GTCATGGTGG GTGGGTCACA AGGTCAGGGG 1080
TTCAAGACCA ACCTGGCCAG CATGGTGAAA CCCCATCTCT ACTAAAAATA CAAAAAATTA 1140
GCCAGGCATG ATGGTGCGTG CCTGTAATCC CAGCTACTCG GGAGGCTGAG GCAGGAGAAT 1200
CACTTGAACC CAGGACGCAG AGGTTGCAGT GAGCCGAGAT CATGCCACTG CACTCCAGCC 1260
TGGGCAACAG AACTAGACTG TCTCAAAAAG AAAAGAAAAA AAGAAAACGT CGTAAGTTGA 1320
AAACACACCT TTAACTTATG TTCAACTTAT GATGGATTTA TGGGATGAAA TTCCAGCATA 1380
AGTCAAGGAG CATCTATAAT TGTGTCTCTT AACCTGCACA GCAACTTTCT GAAGGGAACG 1440
ATATACCGCT TTCATTTTGT AGCTGGAGAC ACTGTAGCTC CAAGAAGTTA AGTGACTTCA 1500
CAGGCTGGGT GTGGTGGCTC ATGCCTGTAA CCCCAGCACT TTGGGAGGCT GAGGTGGGTG 1560
GATCACTTGA GGCCAGGAAT TCAAGAACAG CCTGGCCAAC ATGGCGAAAC CCCATCTCTA 1620
CTAAAACTAC AAAAATTATC CAGGTGTGGT GGCAGGTGCC TATAATCCCA ACTACTTGGG 1680
AGGCTAAGGC AGGAGAATCA CTTGAACCTG GGAGGCGGTG GTTGCAGTGA GCTGAGATTG 1740
TGCCATTGCA CTCCAGCCTG GGCGACAGAG CGAGACTCTG TCTCCAAAAA AAAAAAAAAA 1800
AAAAATGAAA GAAGTTAAGT CACTTCCCAA GGTCAAACCG TTAGTGTAGT GGAAGTTAAG 1860
GCCATTAGTG AAAGATACAT CACTTCTTAA GTTGAAGATT CTATTTACTA CTGAAGGCCG 1920
TCTTTCAGGA GAGGTCATCA GTTTACTTTT GGAGTGAGGG ATGCAGTGAT TGAGAATAGA 1980
AGCATATTGC TAACAAAGGG GAGAAAGAAT AAAAAGAAAG TGGACTGCCA TGGAAGGGAG 2040
CCTTAGGGAA CTGGTCTGAG TGATGTTCTC TTTGGAGGTA AGTAAGGCTT GTCTCTGTCT 2100