| Tag | Content |
|---|
EnhancerAtlas ID | HS091-30381 |
Organism | Homo sapiens |
Tissue/cell | HepG2 |
Coordinate | chr20:25276310-25277000 |
Target genes | | Number: 10 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Foxd3 | MA0041.1 | chr20:25276371-25276383 | GATTGTTTATTT | + | 6.62 |
|
| | Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
| SE_04726 | chr20:25274324-25278928 | Brain_Anterior_Caudate | | SE_05612 | chr20:25273903-25279919 | Brain_Cingulate_Gyrus | | SE_06351 | chr20:25273809-25279187 | Brain_Hippocampus_Middle | | SE_08303 | chr20:25274907-25278982 | Brain_Inferior_Temporal_Lobe | | SE_40630 | chr20:25273802-25278373 | Left_Ventricle | | SE_41624 | chr20:25276027-25277923 | LNCaP | | SE_43731 | chr20:25273874-25282410 | MM1S | | SE_50978 | chr20:25274998-25279007 | Sigmoid_Colon | | SE_53168 | chr20:25274334-25278890 | Small_Intestine | | SE_67254 | chr20:25273874-25282410 | MM1S |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I025293 | chr20 | 25274100 | 25278783 |
|
Enhancer Sequence | GGCTCCTGGG TCCAGAGGCT AGGGGAGCAG CTGGGTGGGT CCATGTAGAC GTGTTGGGTC 60
AGATTGTTTA TTTCCCAAGC TGAGTAGATT CTTGGCCTGG GCCAGAGGGG TTTGTGATTC 120
TGATCTGTCA TCAGTCGGCT GTGCCTGCCT TTAGGGAAGC TGTCACTGTC AATGTCACTC 180
CCTCCGTTGA AAAAAACAGC TCCTAATGGC CAAGAAAGGA ATGTGCGGCC TGGAAACTGA 240
GTGACGGGCA GGGCCCTGGG AGGGACCTTC TCTTCCCTCA GTCAGGGCTG GCCTCGAGGA 300
AAGGCTGGCC TGGTGTGACC TGCAGCTTGT GGCAGCTGTG AGGCTCCCTG GTGGAAGGAG 360
ACTGCCTGGG CATGTCCCCT GGCACTGGAT CTGCCTGGGC AGTTCTTACC TGGTGCTATC 420
CCTATCGTCG TCCTGGGGGC CATGCCCTAG CAGGAATTTT CGAGGCTGGG ACCTTCTCTC 480
CAGCTCCTTG CTCCCTAGAT CTAGAATGCG GTAGCTTTCC TGGTCCGTGG GGTCCCCTTT 540
TCAACGAACA AGTGATTGTA ATGTCCTCCT CTTCCAGCGG ATGGCCCCAA GGCTCGGAGC 600
TCATTTGGAA ACAGTCCTAA AGTTCTGGAA TCCCATGTTT TTAGCAGCCC CAAGCCCTGT 660
GACGCCAGAG ACTAATTTCA TCTCCTTCCC 690
|
