EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS091-28583

Organism

Homo sapiens

Tissue/cell

HepG2

Coordinate

chr2:201727150-201728820

Target genes

Number: 22
Name	Ensembl ID

KCTD18	ENSG00000155729
AOX1	ENSG00000138356
BZW1	ENSG00000082153
AC007163.6	ENSG00000230408
AC005037.1	ENSG00000224346
CLK1	ENSG00000013441
U6	ENSG00000201499
PPIL3	ENSG00000240344
NIF3L1	ENSG00000196290
AC005037.3	ENSG00000183308
ORC2	ENSG00000115942
AC007272.2	ENSG00000225695
AC005037.4	ENSG00000226658
NDUFB3	ENSG00000119013
FAM126B	ENSG00000155744
AC007272.3	ENSG00000224672
AC007283.4	ENSG00000235579
AC007283.5	ENSG00000234431
CASP10	ENSG00000003400
MTND5P25	ENSG00000227348
AC005037.6	ENSG00000235318
CASP8	ENSG00000064012

dbSUPER

Number of super-enhancer constituents: 23
ID	Coordinate	Tissue/cell

SE_10741	chr2:201727202-201730260	CD19_Primary
SE_13095	chr2:201727175-201730089	CD34_Primary_RO01480
SE_14004	chr2:201724903-201730147	CD34_Primary_RO01536
SE_14869	chr2:201724131-201730452	CD4_Memory_Primary_7pool
SE_15606	chr2:201727203-201730310	CD4_Memory_Primary_8pool
SE_16017	chr2:201727082-201730433	CD4_Naive_Primary_7pool
SE_16539	chr2:201725848-201730248	CD4_Naive_Primary_8pool
SE_17161	chr2:201727248-201730161	CD4p_CD225int_CD127p_Tmem
SE_17729	chr2:201722247-201730612	CD4p_CD25-_CD45RAp_Naive
SE_18171	chr2:201723763-201730779	CD4p_CD25-_CD45ROp_Memory
SE_19795	chr2:201725387-201730320	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20434	chr2:201725663-201730468	CD56
SE_21181	chr2:201725390-201730493	CD8_Memory_7pool
SE_21610	chr2:201725648-201730311	CD8_Naive_7pool
SE_22098	chr2:201724737-201730250	CD8_Naive_8pool
SE_22634	chr2:201723558-201730496	CD8_primiary
SE_30302	chr2:201727209-201730346	Fetal_Muscle
SE_32281	chr2:201727219-201730386	Gastric
SE_35775	chr2:201727243-201730515	HepG2
SE_43070	chr2:201727115-201730515	Lung
SE_53116	chr2:201727085-201730406	Small_Intestine
SE_53877	chr2:201727225-201730361	Spleen
SE_62858	chr2:201725123-201730441	Tonsil

Enhancer Sequence

CACCCTTAAG AAGGTTCTTT GTAATTCTCC CCGCCCTTGA GAATGTACTT TGTGAGATCC 60
GCCCCCTGCT CCCAAAACAT TGCTCTTAAC TCCACCGCCT ATCCCAAAAC CTATAAGAAC 120
TAATGATAAT CCCACCACCC TTTGCCGACT CCTTTTTCTG ACTCAGCCCG CCTGCACCCA 180
GGTGAAATAA ACAGCCATGT TGCTCACACA AAGCCTGCCT TTAGTGGTCT CTTCACAGAC 240
ACGTGAAACA CACGTCATTC TCCCCGTTTA AACGTGTACC AGAAACTAGT CTCCAACTCA 300
AATGCAATCA TAAATGTTCC TCACCAACAC CGCATTACTG ATTACTGCAA ACGTAATCAG 360
AGTTATATCT GAGTTGCTGA CAGAATCATC ATTACAGAGC ATTTCCGTAA ACGGACAAAT 420
GAAACTACCA AGGACTTTAA TCACACACGA AGGCAACGGT GGCATCAGAA TATAAAAACA 480
ACAAAACACC ATCTTTCCAG TACCACTCCC AAGCACATAC AACATAATTT ATCCTAAACG 540
CAATGTTAAC ACAATCTTTT TGGGAATGGT AGGAGCCACC TTCTTTTCAG AAATGCTTCG 600
AGCAAAATCG AAAATCTCTA ACCTAACAAC TTGAAAAAGA CATTATACAG AAATTACTTC 660
ATCAACTGCC GTTCTTTCTT ACCGGCGGGA CCCCTCTGTG TCTTCCGCTA CAATTCTTTT 720
TTTTTTAACG CCAGTCAAAT TTAGCGGTAG GGGTTGTATA CTAATTTTCG TGACACTAAT 780
AACTATTAAG TTCTGATAAC CCACTACCAT TGGACCAGCC TGAGTATAAT TTTTAAAGCC 840
CTCCAATTGG GTCGGGGGCC GTGGCTTATG CCTGTAACCC CAGCACTTTG GGAGGCCGAA 900
GCAGGAGGGC TGCTTGAGCC CAGGAATTCG AGACCAGCCA GGGTAATATA GAGAGACCCC 960
GCCTCTATAA AAAATAAAAA ATTAACCAGG AGTGGTGGCG CGCGCCTGTA GTCCCAACTA 1020
CTCAGGAGGC TGAGGTGGGA AGATCACCTG AGCCCAGATG TCGAAGCTGC AGTGAGCCGT 1080
CATTGCGCCA CTTGCACTCC GGCCGGGGCG ACAGGGGCGA GACCTTGTCT CAAAAAAGAA 1140
AAAAAGGAGG CTGGGCGCAG TGGCTCACAC CTGTAATCCC AGCACTTTGG GAGGCCGAAG 1200
CGGATGGATC ACCTGAGGTC AACAGTTTGA GGCCAGCTTA ATATGGTGAA ACTCTGTCTC 1260
TACTAAAAAT ACAAACATTA GCCCGGCGTC GTGGCGGGCG CCTGTAATCC CAGCTATCCC 1320
GGAGGCTGAA GCAGGAGAAT CGCTTGAACC CGGGAGGCGG AGGCTGCAGT GACTCGAGAT 1380
CGCGCCACTA CACTCTAGCC TGGGCGACAG AGCGAGACTC CAAGAAAAGA AAAAAGCTCC 1440
AACTGCTAAC CCAAGAGGAG TGGCTGAAAC GCCATCGCAT AAAATTCTCG GTCACCTGAC 1500
TTCTGTCACA ACGCTCCTTC AAATACACCC CAGCATTTCT CTTTCCTTGG GTTCCTAAAT 1560
CTGGTTTTTG TTAACACCAC TGAGGACAAA GCCACTCGCG ATGTTTACGC CGACACTTTC 1620
ATCATTAGAC ATTAACTGTA ACCCCTACGG GTTCCGTCTC TTTCTCCACT 1670