EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS091-24710

Organism

Homo sapiens

Tissue/cell

HepG2

Coordinate

chr19:54932560-54933360

Target genes

Number: 25
Name	Ensembl ID

NDUFA3	ENSG00000170906
PRPF31	ENSG00000105618
TFPT	ENSG00000105619
CNOT3	ENSG00000088038
LENG1	ENSG00000105617
MBOAT7	ENSG00000125505
TSEN34	ENSG00000170892
AC012314.20	ENSG00000223660
RPS9	ENSG00000170889
AC010492.2	ENSG00000235081
LILRB3	ENSG00000204577
LILRA6	ENSG00000244482
AC008984.6	ENSG00000250507
AC008984.2	ENSG00000248166
LILRA4	ENSG00000239961
LAIR1	ENSG00000167613
TTYH1	ENSG00000167614
AC008746.3	ENSG00000227407
AC008746.5	ENSG00000235681
LENG8	ENSG00000167615
LENG9	ENSG00000182909
CDC42EP5	ENSG00000167617
LAIR2	ENSG00000167618
KIR3DX1	ENSG00000104970
LILRA2	ENSG00000239998

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Zfx

MA0146.2

chr19:54932967-54932981

GGGGCTGAGGCCTG

6.21

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_03534	chr19:54931743-54933853	Brain_Angular_Gyrus
SE_04377	chr19:54926568-54933990	Brain_Anterior_Caudate
SE_05139	chr19:54925733-54934239	Brain_Cingulate_Gyrus
SE_06079	chr19:54925536-54935449	Brain_Hippocampus_Middle
SE_07030	chr19:54925765-54936104	Brain_Hippocampus_Middle_150
SE_08186	chr19:54926601-54935209	Brain_Inferior_Temporal_Lobe
SE_09025	chr19:54932599-54932845	Brain_Mid_Frontal_Lobe
SE_47477	chr19:54931719-54932932	Pancreas
SE_65407	chr19:54931051-54933049	Pancreatic_islets

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I054417

chr19

54928982

54933470

Enhancer Sequence

TGGTGAGGGG CCAGCAACCA GTGGGACCCC AGACCCACAC CTGGACGGGC TCCCCACACC 60
CAAGGACAAA GGGATCCAAA CTCAGAGCTA AGACCCCAGG CTTGAAGCTT AGGAACCCAG 120
ATTCAGAACT TCATCCTGAG ACCCACAGAC CTCAGACTAT CCACCCAACC CCCGACCCTG 180
GCTGCAAATT GAGGACCTCA CACACAGGCC CAGCCCTGGA CCTTACCTGG AACCCCCAAG 240
CCACACAGAA ACCAAGCACC AGCGACACCA GCCCCTGTCC ACGGGCCAGA TCCAGGGCCC 300
CAGACCTGAT TCTTGGCCCG TAAGCAAGCT CAGGGACCCC CGCCCTGAGG CCCAGGTCCC 360
CGACTTGAGG CTTCAGCTCC GACATCAGCT CCAGGATTCT GGGCCCTGGG GCTGAGGCCT 420
GGCCCCACTT CATGCCTTAG ATTCCATGTC CAGCTGCAGA CTCTAGACCA TGGGACCCAG 480
ACTTGAGACC CCAGATTCTG GAAGGCAGAT GAAAACTTCA GACCTAAAGC TCCACACTTA 540
ATCTCAGTCC TGGGGCTGGA CTTACTACCC TGGGCTCAAG CTACCAACCA TCCAGAGCTC 600
TGGATAGAGG CCACAGAACT CCATGAACTT GATCTTGAAG CCCCTCCCCA ATCCCTTCCC 660
TTACTCAATC CTCAGATGTC CCAGACTCCA GATCTCAGAC ACCCGCTACT ATGCACCCCT 720
CCTTCACTTC TAAAACCCCA TGCCTCGACC GCGGGCTCCC CCCAGGATGT CCTTCCAGAC 780
CTCAGCCCCT GTCCTATCCC 800