| Tag | Content |
|---|
EnhancerAtlas ID | HS091-24402 |
Organism | Homo sapiens |
Tissue/cell | HepG2 |
Coordinate | chr19:47628020-47629070 |
Target genes | | Number: 18 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr19:47628651-47628670 | TGTTGCCCCCTAGAGGACA | - | 6.17 | | FOXA1 | MA0148.4 | chr19:47628973-47628989 | AATTGTTTACATAGCA | - | 6.54 | | Foxa2 | MA0047.2 | chr19:47628976-47628988 | TGTTTACATAGC | + | 6.32 |
|
| | Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
| SE_23136 | chr19:47628103-47628657 | Colon_Crypt_1 | | SE_23866 | chr19:47628281-47628588 | Colon_Crypt_2 | | SE_42396 | chr19:47628105-47628801 | Lung |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I047125 | chr19 | 47628258 | 47629190 |
|
Enhancer Sequence | ACAGGCCTGA GCCACCGCGC CCGGCCAATT TTGTATTTTT AGTAGAGATG GGGTTTCACC 60
ATATTGTCCA GGCTGGTCTC AAACTCCTGA CCTCGTGATC CGCCTGCCTC GGACTCCCAA 120
AGTGCTGGGA TTACAGGCAT GAGCCACCAC GCCCAGCCAG AATTTTTTCT TTTTTCTAGA 180
GAAGGGGGTC TCCGTATGTT GCCCAGTCTG GTCTTGACCA CCTGACCTTC ATTGATTTTC 240
CTACGTCGGC CTCCCAAAGT GGTGGGATTA CAGGTGTGAG CCACTGCCAC CGGCCAGTAA 300
TTATGCTGAT GAAAGACCTG TTTTTTCTCC AGTTCCTGGG ATGGCTCTAG GGAGGGTTAT 360
TTACACTGTG AGTGAGGAGG CATTCACAGA GAAGTTCCTC CAGAGTGTGG AAGAAGCACT 420
ACCATTTGGC ACCAACGCCT GGAGAACAAA GGAGGAGACC ATTGGCCAAA GAGAGGCATT 480
TCCATTTTGT TGGAACCTGC TGACCACCAA CCCATAGCAT TTTTTCCCTT TCTTCCTTGC 540
TAATCCAATC GCAGATTCAT TGAGGAGGTG AGAGGTCCTG AGATCCAGGC TGGAAGAGGA 600
GTGATTGGTC TACCTGGTTC TCAAGGGATA ATGTTGCCCC CTAGAGGACA TTTTGGAAAT 660
TATTAAGGAA AATTAACGAC TGGTTTTTTG GTTGTCATCT GGTTCTCAAG GGAACAGTAT 720
TGCTTCCTTG GGAGAATTTG GAAACTTACC TTTTTTCATC GTCACAATGG TGAAGGGTTT 780
GTTACTGGGA TTAGAGGACA AGGACCAGAC ATGCCAAGAT GTTCTACAAT ATAGCATTCC 840
TAATTAATAA TCACCTAATG AATAAAGCTC AGATAGCACT TAAAAAGTGG GGAAAGGACT 900
GTTTATACTA AATTATGCTA AGCTGTAACA CTGAACTATT CCAGTTCTTT TGAAATTGTT 960
TACATAGCAA AATCATAGTT GACTCCTGGC CATTTAAGAC TTATGCCACC ACTCTTGGGA 1020
TAGTGAAAAT GTTTTGCAAC TAGATTGAGG 1050
|
