EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS091-24182

Organism

Homo sapiens

Tissue/cell

HepG2

Coordinate

chr19:42891630-42893070

Target genes

Number: 17
Name	Ensembl ID

RPS19	ENSG00000105372
RABAC1	ENSG00000105404
ZNF574	ENSG00000105732
POU2F2	ENSG00000028277
DEDD2	ENSG00000160570
ZNF526	ENSG00000167625
GSK3A	ENSG00000105723
AC006486.1	ENSG00000204957
ERF	ENSG00000105722
CIC	ENSG00000079432
PRR19	ENSG00000188368
PAFAH1B3	ENSG00000079462
TMEM145	ENSG00000167619
MEGF8	ENSG00000105429
CNFN	ENSG00000105427
AC011497.1	ENSG00000213904
CEACAM1	ENSG00000079385

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr19:42892177-42892198	AAAAAGAAAAAGAAATTAAAG	-	6.17
IRF1	MA0050.2	chr19:42892153-42892174	AAAAAAAAAACGAAAGAAAGA	-	6.4
KLF5	MA0599.1	chr19:42891650-42891660	GGGGCGGGGC	-	6.02
Nr2f6(var.2)	MA0728.1	chr19:42892565-42892580	TGAACTCCTGACCTT	-	6.04
Zfx	MA0146.2	chr19:42892282-42892296	CCCGCCTCGGCCTC	+	6.01
Zfx	MA0146.2	chr19:42891893-42891907	GAGGCCTAGGCGGG	-	6.24

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I042386

chr19

42890751

42892130

Enhancer Sequence

GGGCGGGGCG CAGGCGCTCA GGGGCGGGGC CAGCCGGGGC CTCCCGACGG CTCCGCCCCG 60
GGGGGGGCGC GGTTGATTCG CCGCGGAGGG GCATTGAGGG TCCCAGCCAA GGAGAGGTCC 120
CAGAGGGAAT TAGAGGTCCG AGGAGAGGAT GGCTTAGCGA TTGGAAGGCA GGGTTTTTCT 180
TTTTTTTTTT TTCTTCTTTT TTTTTTTTTT TAGAAATTGG AGGCTGGGTG CAGTGGCTTA 240
CGCCTGTAAT CCCAGCACTT TGGGAGGCCT AGGCGGGAGG ATCACGAGGT CAGGGGTTTG 300
AGACCAGCCT ACCCAACATA GTGAAACCCC GTCTCTACTA AAAATACAAA AATTAGCCGG 360
GCGTGGTGGT GTGTGCCTGT AATCTCAGCT ACTAGGGAGG CTGAGGCAGG AGAATCGCTT 420
GAACCCGGGA AGCGGAGGTT GCAGTGAGCA TAGACTGTGC CATTGCATTC CAGCCTGGGC 480
GACAGAGCAA TACTCCGTCT CAAAAAAAAC AAAAAACAAA ACAAAAAAAA AAACGAAAGA 540
AAGAAAAAAA AAGAAAAAGA AATTAAAGTC TCGGTCTGTC ATCCAGGCTG GAGTGCAGTG 600
GTGTGATCAC ATGTCTCACT GTAGCCTCGA CCTCCTGGGC TCAAGCAATC CTCCCGCCTC 660
GGCCTCCCGA GTAGCTGGGA CTACTGGTGT GTGCCACCAC CTCGGGCTAA TTTTATTTTT 720
TATTTTTATT TTTGAGACGG AATCTCGCTC TGTTGCCCAG ACTGGAGTGC AGTGGCGTGA 780
TCTCGGCTCA CTGCAACCTC TGTCTCCCGG GTTCAATCAA TTCTCTTTCT CAGCCTCCCG 840
AGTAGCTGAG TTTACAGGCG CCCGCCACCA CGCCCGGTTT TTTTTTTTGT ATTTTTAGTA 900
GAGACGGGGT TTCACCATCT TGGCCAGACT GGTCTTGAAC TCCTGACCTT GTGGTCCACC 960
TGCCATGGCC TCCCAAAGTC CTGGGATTAC AGGCGTGAGC CACTGCGCCC GACCTATTTT 1020
TTATTTTTAT TTTTGTAGAG ATGGGGATCT CATTATGTTG CCCAGGCTGA TCTTGAATTC 1080
CTGGCCTCAA GGGATTGTCA TGCCTTGGCC TCCCAAAGTG TTGGGATTAC AGGCATGAGC 1140
CACTGCACTG GGCCAGGAGC TAGGGTTTGA AGAGGGAGTT GGGGGTCACA GTGAGGAAAG 1200
CTGAGCATGC AAAGGGGAGG TTGAGGGCCT GATAAGTTGA GTGTGGGAAG GCATGAGGTA 1260
GTATCCTAAG GAGTGTTGGG GGTCTGAGGA AAGGGTGACT GTTAGAGTGG GAATTCCAAG 1320
TCCAGGGAAG GGAGGTGGGA GTGGGGTTAG CAAGCGGTGG GAGGAGGTTG GAGGTGAGCT 1380
TCCCTCTCCT GATTCCCCCC AAACCCATCT TCCACCAGGC CTGGAGAGGG AGCAGGCAGG 1440