| Tag | Content |
|---|
EnhancerAtlas ID | HS091-24050 |
Organism | Homo sapiens |
Tissue/cell | HepG2 |
Coordinate | chr19:39887320-39888090 |
Target genes | | Number: 17 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr19:39887669-39887690 | AAAAAAAAAAAGAAAGTAGTA | - | 6.57 | | IRF8 | MA0652.1 | chr19:39887647-39887661 | ACAAAACCGAAACT | + | 6.1 | | IRF9 | MA0653.1 | chr19:39887646-39887661 | AACAAAACCGAAACT | + | 7.49 |
|
| | Number of super-enhancer constituents: 38 | ID | Coordinate | Tissue/cell |
| SE_00388 | chr19:39887713-39905863 | Adipose_Nuclei | | SE_01016 | chr19:39887759-39889789 | Adrenal_Gland | | SE_06347 | chr19:39887560-39906641 | Brain_Hippocampus_Middle | | SE_07537 | chr19:39887730-39890212 | Brain_Hippocampus_Middle_150 | | SE_09269 | chr19:39887413-39904333 | CD14 | | SE_10194 | chr19:39887963-39889981 | CD19_Primary | | SE_10961 | chr19:39887353-39906237 | CD20 | | SE_11857 | chr19:39887832-39889799 | CD3 | | SE_17784 | chr19:39887382-39905568 | CD4p_CD25-_CD45ROp_Memory | | SE_18577 | chr19:39887582-39905820 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19989 | chr19:39887623-39905090 | CD56 | | SE_22320 | chr19:39887549-39905712 | CD8_primiary | | SE_23070 | chr19:39887592-39888501 | Colon_Crypt_1 | | SE_23748 | chr19:39887902-39888472 | Colon_Crypt_2 | | SE_24695 | chr19:39887662-39889983 | Colon_Crypt_3 | | SE_25867 | chr19:39887781-39890965 | Duodenum_Smooth_Muscle | | SE_26556 | chr19:39887574-39891135 | Esophagus | | SE_27637 | chr19:39887892-39895327 | Fetal_Intestine | | SE_28560 | chr19:39887749-39895499 | Fetal_Intestine_Large | | SE_31113 | chr19:39887797-39889914 | Fetal_Thymus | | SE_31423 | chr19:39887615-39889996 | Gastric | | SE_34337 | chr19:39887512-39890912 | HCT-116 | | SE_34772 | chr19:39887524-39890908 | HeLa | | SE_40716 | chr19:39887668-39890007 | Left_Ventricle | | SE_44274 | chr19:39887753-39890026 | NHDF-Ad | | SE_47104 | chr19:39864576-39910331 | Panc1 | | SE_47612 | chr19:39887706-39889222 | Pancreas | | SE_48102 | chr19:39887567-39890034 | Psoas_Muscle | | SE_48652 | chr19:39887631-39889956 | Right_Atrium | | SE_50060 | chr19:39887598-39891127 | Sigmoid_Colon | | SE_51233 | chr19:39887465-39890247 | Skeletal_Muscle | | SE_52346 | chr19:39887595-39891202 | Small_Intestine | | SE_54591 | chr19:39887671-39890094 | Stomach_Smooth_Muscle | | SE_55153 | chr19:39887997-39889730 | Thymus | | SE_56945 | chr19:39887992-39889969 | VACO_400 | | SE_57955 | chr19:39887805-39889956 | VACO_9m | | SE_61156 | chr19:39887887-39904728 | HBL1 | | SE_62278 | chr19:39887834-39905563 | Tonsil |
|
Enhancer Sequence | GTGCTACTGC ACTCCAGCCT GGGCAACAGA GCGAGATTCC ACCTCAAAAG AAAAAAAAAA 60
AAGCCTGGGC GCGGTGGCTC ATGCCTGTAA TTCCAGCACT TTGGGAGGCT GAGGCGGGTC 120
GGTCACCTGA GGTCATGAGT TTGAGACCAG CATGGCCAAT GTGGTGAAAC CTTGTCTCTA 180
CTAAAAATAA AAAAAAAATT AGCCGGGTGT GGTGGCGGGT GCCTGTAATC CCAGCTACTC 240
GGGAGGCTGA GGCAGGAGAA TCACTTGAAC CTGGGAGGCG GAGGTTGCAG TGAGCTGAGA 300
TCGTGCCATT GCACTCCAGC CTGGGCAACA AAACCGAAAC TCCATCTCAA AAAAAAAAAA 360
GAAAGTAGTA CCTAGAGCAG CCAGAGAAGC AGGCAGAAAA CCAGGGGTGA GATGCCACTG 420
CCAACACCAG GCCTGGAGCC AGGGCAGTAA CAATGATAGT AGCTAACAGT TCTTGGCACT 480
TTAAACAGTG TGCCAGGACC CGTGCCTGTG TCTCATACAC CTGCTCTCAC TGTTCTCACC 540
TTATGAGGTA GGAAGAGGTG GTTATTAAAC CCGTTTTCCA AAGGAGGAAA CTGAGGCTCA 600
GAGAAGAGTA GCCGCCATGC CCCCAGGTTC CCCAGCAAAT GACTGGCAGG GCCAACCTCT 660
GACTCTAAGA CCTGGGAAAT CCAGAGGCCA AGCCGACAAC CCCCAGCTGG CCCTTGGGGT 720
GGGGTAGAAT GACCTCGGGT GGAGCTGATG CTGTCCCCTT GCCTGCCTGT 770
|
