Tag | Content |
---|
EnhancerAtlas ID | HS091-23994 |
Organism | Homo sapiens |
Tissue/cell | HepG2 |
Coordinate | chr19:39127600-39128490 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr19:39127631-39127650 | TGCCCACCAGAGGGAGCTC | + | 6.36 | RREB1 | MA0073.1 | chr19:39127697-39127717 | CCCCACCACACCACACCCCA | + | 6.83 | ZNF263 | MA0528.1 | chr19:39127730-39127751 | GCCTCCTTTTTCCCCTGCTTC | - | 6.03 |
|
| Number of super-enhancer constituents: 31 | ID | Coordinate | Tissue/cell |
SE_00117 | chr19:39126719-39127932 | Adipose_Nuclei | SE_07777 | chr19:39124999-39128150 | Brain_Inferior_Temporal_Lobe | SE_09404 | chr19:39127026-39128392 | CD14 | SE_14624 | chr19:39125409-39128000 | CD4_Memory_Primary_7pool | SE_19537 | chr19:39126410-39128305 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20249 | chr19:39125184-39128305 | CD56 | SE_22709 | chr19:39125315-39128147 | CD8_primiary | SE_23062 | chr19:39126303-39128540 | Colon_Crypt_1 | SE_23732 | chr19:39127169-39128050 | Colon_Crypt_2 | SE_23732 | chr19:39128195-39128530 | Colon_Crypt_2 | SE_24739 | chr19:39126271-39128151 | Colon_Crypt_3 | SE_25779 | chr19:39126515-39128552 | Duodenum_Smooth_Muscle | SE_26525 | chr19:39126294-39128542 | Esophagus | SE_27614 | chr19:39126129-39128564 | Fetal_Intestine | SE_28533 | chr19:39125197-39128591 | Fetal_Intestine_Large | SE_31384 | chr19:39126254-39128532 | Gastric | SE_34299 | chr19:39127448-39128325 | HCT-116 | SE_34681 | chr19:39125438-39128519 | HeLa | SE_35812 | chr19:39126961-39128568 | HMEC | SE_40018 | chr19:39127676-39128265 | K562 | SE_40594 | chr19:39125225-39128559 | Left_Ventricle | SE_42097 | chr19:39126229-39128147 | Lung | SE_48555 | chr19:39127244-39128081 | Right_Atrium | SE_50056 | chr19:39125256-39128091 | Sigmoid_Colon | SE_52339 | chr19:39126291-39128529 | Small_Intestine | SE_53291 | chr19:39126576-39128320 | Spleen | SE_56725 | chr19:39127757-39128565 | VACO_400 | SE_62811 | chr19:39125155-39186863 | Tonsil | SE_64225 | chr19:39126864-39127750 | NHEK | SE_65266 | chr19:39127405-39128267 | Pancreatic_islets | SE_68725 | chr19:39127316-39128496 | H9 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH19I038634 | chr19 | 39124861 | 39129751 |
|
Enhancer Sequence | GTCTCCTCCC TGGCTTCCTG CCTCTGCCCC TTGCCCACCA GAGGGAGCTC AGGAGCAGGC 60 CTCTGCTCTG GGTTGGCCCC CGCACCGTAC CCCCAGCCCC CACCACACCA CACCCCATGG 120 CGGGGTTTCC GCCTCCTTTT TCCCCTGCTT CGACTTCCTC CCTTGCCCCA CCCTACCTTC 180 CTGACCTTTT AGGTCTTGGG TGGGGAGGGC AGCATTGAGT CAGCAAGGAG GAGGGAGTAT 240 GAATGGGATG TGGCAGCCCA GCCCTGTGGT GGAGGCTGAG CACCTCTGGG AGGAGTGAAG 300 GTGAAGTTTC CCTCTGTCTT GATGGTGGCT CTTGCTTTGT GACCTTGGTC AAGGGACTGT 360 GCCTCTTTTT TTTTTAGACG AAGTCTCGCT CTGTCGCCCA GGCTGGAGTG CAGTCGCGCG 420 ATCTCGGCTC ACTGCACGCT CCACCTCCCG GGTTTATGCC ATTCTCCTGC CTCAGCCTCC 480 AGAGTAGCTG GGACTACAGG CGCCCGCCAC CATGCTCGGC CAATTTCTTG TATTTTTAGT 540 AGACAGGGTT TCACCGTGTT AGCCAGGATG GTCTTGATCT CCTGACCTTG TAATCTGCCT 600 GCCTCGGCCT CCCAAAGTAC TGGGATTACA GGCGTGAGCC ACCGCGCCCA GCCGGGATTG 660 TGCCTCTCTA ATTCTCAGTT TCTTCATCTG CAGAAGGGGA AGAATAATGC ACCCTTCTGA 720 AACCTGTGAG GGTTTCTCCG GCCCTTGCCA GTAAAGGCCT GAGATTGGGG CCTGTCCTGT 780 CCTGTCCTTG CTCTTAGAAA ATGTGAGCCA CAGGCCGGGT GCAGTGGTTC ACGCCTGTAA 840 TCCCAACACT TTAGGAGGCC AAAGCAGGAG GATTGCTTGG CCAGAGTTTG 890
|