Tag | Content |
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EnhancerAtlas ID | HS091-23993 |
Organism | Homo sapiens |
Tissue/cell | HepG2 |
Coordinate | chr19:39125760-39127520 |
Target genes | Number: 23 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RAX | MA0718.1 | chr19:39127318-39127328 | GTTAATTGGC | - | 6.02 | TBX21 | MA0690.1 | chr19:39126888-39126898 | AAGGTGTGAA | + | 6.02 | TBX2 | MA0688.1 | chr19:39126888-39126899 | AAGGTGTGAAT | + | 6.02 |
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| Number of super-enhancer constituents: 43 | ID | Coordinate | Tissue/cell |
SE_00117 | chr19:39126719-39127932 | Adipose_Nuclei | SE_03903 | chr19:39125172-39126135 | Brain_Anterior_Caudate | SE_06803 | chr19:39125081-39126309 | Brain_Hippocampus_Middle_150 | SE_07777 | chr19:39124999-39128150 | Brain_Inferior_Temporal_Lobe | SE_09404 | chr19:39127026-39128392 | CD14 | SE_13490 | chr19:39126946-39127606 | CD34_Primary_RO01536 | SE_14624 | chr19:39125409-39128000 | CD4_Memory_Primary_7pool | SE_19537 | chr19:39126410-39128305 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20249 | chr19:39125184-39128305 | CD56 | SE_22709 | chr19:39125315-39128147 | CD8_primiary | SE_23062 | chr19:39125394-39125979 | Colon_Crypt_1 | SE_23062 | chr19:39126303-39128540 | Colon_Crypt_1 | SE_23732 | chr19:39126383-39127068 | Colon_Crypt_2 | SE_23732 | chr19:39127169-39128050 | Colon_Crypt_2 | SE_24739 | chr19:39125322-39126070 | Colon_Crypt_3 | SE_24739 | chr19:39126271-39128151 | Colon_Crypt_3 | SE_25779 | chr19:39126515-39128552 | Duodenum_Smooth_Muscle | SE_26525 | chr19:39125324-39126266 | Esophagus | SE_26525 | chr19:39126294-39128542 | Esophagus | SE_27614 | chr19:39126129-39128564 | Fetal_Intestine | SE_28533 | chr19:39125197-39128591 | Fetal_Intestine_Large | SE_31384 | chr19:39125353-39125941 | Gastric | SE_31384 | chr19:39126254-39128532 | Gastric | SE_34299 | chr19:39125367-39126196 | HCT-116 | SE_34299 | chr19:39126353-39127223 | HCT-116 | SE_34681 | chr19:39125438-39128519 | HeLa | SE_35812 | chr19:39126961-39128568 | HMEC | SE_40594 | chr19:39125225-39128559 | Left_Ventricle | SE_42097 | chr19:39126229-39128147 | Lung | SE_48555 | chr19:39125255-39125967 | Right_Atrium | SE_48555 | chr19:39127244-39128081 | Right_Atrium | SE_50056 | chr19:39125256-39128091 | Sigmoid_Colon | SE_52339 | chr19:39125254-39126146 | Small_Intestine | SE_52339 | chr19:39126291-39128529 | Small_Intestine | SE_53291 | chr19:39125292-39126203 | Spleen | SE_53291 | chr19:39126576-39128320 | Spleen | SE_56725 | chr19:39125425-39126107 | VACO_400 | SE_56725 | chr19:39126329-39127678 | VACO_400 | SE_62811 | chr19:39125155-39186863 | Tonsil | SE_64225 | chr19:39126864-39127750 | NHEK | SE_65266 | chr19:39125298-39126341 | Pancreatic_islets | SE_65266 | chr19:39126385-39127265 | Pancreatic_islets | SE_68725 | chr19:39127316-39128496 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr19 | 39126150 | 39126621 | chr19 | 39126646 | 39126984 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I038634 | chr19 | 39124861 | 39129751 |
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Enhancer Sequence | GAGTGGTGAC CCACGGCCTC GGGCTTTGGG GCTAAGGGGG TGCCCCTCAA GGGAGGCCGA 60 GGCAGGGGCC CAGAGGACCT GGGTAGATCT GCTCGTGTTC TGGGCTGGGA AGTCTGCACC 120 TGCCAGATTC CATTCACCTT GTGTCTTGGG GCTCCCGCCC AGGAGGAATA GCGGGGAGCT 180 GGGTGATCTT CCCTGGAACT TCTAGGCCCT GTGTCCTGCC CCATAGCACT CAGCAAGACT 240 TCCTGGGGCC CAGCGGGGCC TCACAGGGGG TCTCTGCACC CTTATTTGTC CCTGAGGCCT 300 GTCTCGTTGG CCATCTTTTA TTCTTGGGGT GCCCAAGCCT CATGTGCAGA CTTGGAATCC 360 GGTGAACAGT AGGAATCTTG ATTCTCTAGT TTGGGTGATT CCACATTTTT GTGCCTCAGT 420 TTTCTCATCT AAAAAATGGG GACGACTGCA ACAGTAACTA TGATAAACAC TGTGTAGGTC 480 CTTACACTTA CATCATTTGA TCCTCAGTTG CTAAATGATA TAAATAGTAT CATACCTACC 540 TCATGGCATC ATAAGTGTGA ATGCATGTAT AACACTTAGC AAAGAGCTAA GTGACCACAC 600 AGTTCATTAA ATGTTCATTA TGACCATCGT CTACACACAT GTAACTAACA CAGGCTCAAC 660 TGCTTGCTCA ACTAAAAAGA TTGCAGTGGC TACTCCGGCA GCGGGTGCTG CTTCACTGCC 720 GCTCATCATG GCACTGAGCA GATGTCCTGG AGCCAGGGAG AAAGGCACAG GCGGGCTGCT 780 GCCTTCATCC CGGGTCTCCC CCACCCGCTT GAGTGTGATT CAGGTGTTTT AAAGATGTGT 840 TTGGTACAAC GTGGTTTCTT AACACAAACC AGCTAATTTT GTACTTAACT GGGGAACAGC 900 ATTGAGCAGG CAGCCATCTG CGCACTTGCA GCCCGTGGTA TCTCACCTCT AAACGCCGCG 960 TGACTGCTGT GTCGGGGTTC TCAGTGAGAA CTCCAGCAAA AGATTCTGTA GTGAGGAAAG 1020 GGCCTCCTTT CTTCTCCCCT TTGGCTTCTG TTGCCCCACC CCACCTTCCT GACCTTTTAG 1080 GTCACAGGTG GAGAGGGCAG TGCTGAGTCA ACAAGGAAAA GGAGGAGGAA GGTGTGAATC 1140 TCAGGGAAGT AGGAGCCCAG CCCTGCCGGG GGAGTAGACG GGAGGGTTCC CTCTGTCTCA 1200 GTTCTGGCTC CATTGCTCTG TGTCCTGGGT CAAACAGGAT AGGTTCAAAA TACTCAGGAG 1260 GCTGAGGCAG GAGAATCACT TGAACCCGGA AGGTGGAGGT TGCAGTGAGC CAAGATCGCT 1320 CCACTGCACT ACAGCCTGGG CAACAGAATG AGACTGTGTC TCAAAAAAAA ACTTAAGAGT 1380 ATCCTGCAAA TAGTACCTAG TAAATATTAT CATGTAGGTA ATTACAAACA ACACTTCCTT 1440 GGCACTTTGT TCTAAGCACC TCGTTTGGTC CTACAATCCT ATAAGGTAGG TGCTTCTTAA 1500 AGATAGGAAG GTAGGTGATG CTCAGAGATG TTCAGTAACT TGTCCAAGTG ACCCAGCTGT 1560 TAATTGGCAG AGCTGGGATT TGAACCTAGC CCTCCTTGCT CCAGAGTCCA TCTTTTTAAA 1620 ATACTGCACC AAACTGCCTT TGTGATGGTA ACTGGGGCCT GGAAGGAGTT TATGATCTCC 1680 CCCTAAAGAA TTGTGGGTGC TGTAGCAGGT GGCTGGAGGT TTGTCTCCCG CCCTTCTCAC 1740 CTTCAGTCTG GTCTCTCCTT 1760
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