| Tag | Content |
|---|
EnhancerAtlas ID | HS091-23983 |
Organism | Homo sapiens |
Tissue/cell | HepG2 |
Coordinate | chr19:38740150-38741870 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr19:38740312-38740333 | AAAAAAAAAAAGAAAGAAAGA | - | 6.25 | | RORA(var.2) | MA0072.1 | chr19:38740609-38740623 | CAAAATTAGGTCAG | + | 6.31 | | RREB1 | MA0073.1 | chr19:38741629-38741649 | GGGATGGGGGTGGGGTGGGG | - | 7.6 |
|
| | Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
| SE_01689 | chr19:38740931-38747520 | Aorta | | SE_05719 | chr19:38740660-38747663 | Brain_Cingulate_Gyrus | | SE_06505 | chr19:38740590-38747917 | Brain_Hippocampus_Middle | | SE_07180 | chr19:38740889-38747836 | Brain_Hippocampus_Middle_150 | | SE_08496 | chr19:38740686-38747316 | Brain_Inferior_Temporal_Lobe | | SE_25091 | chr19:38741524-38742381 | Colon_Crypt_3 | | SE_26813 | chr19:38740945-38745091 | Esophagus | | SE_28041 | chr19:38740215-38744553 | Fetal_Intestine | | SE_28992 | chr19:38740170-38744794 | Fetal_Intestine_Large | | SE_31775 | chr19:38741211-38744981 | Gastric | | SE_42903 | chr19:38740948-38745109 | Lung | | SE_50478 | chr19:38740872-38745107 | Sigmoid_Colon | | SE_52743 | chr19:38740952-38744999 | Small_Intestine | | SE_53909 | chr19:38740815-38745113 | Spleen | | SE_55044 | chr19:38740872-38747517 | Stomach_Smooth_Muscle |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I038249 | chr19 | 38740295 | 38745432 |
|
Enhancer Sequence | AATACAAAAA ATTAGCCGGG CATGGTGGCG CATGTCTGTA ATCTCAGCTA CTCAGGAGGC 60
TGAGGCAGGA GAATCGCTTG AACCCAGGAG GCAGAGGTTA CAGTGAGCCG AGATCGCACC 120
ATTGCACTCC AGCCTGGGCA ACAAGAGCAA AACTTCATCT TAAAAAAAAA AAAGAAAGAA 180
AGAAAGAAAA AAAAGACAAT GTTGAAATAG AGGGCTGGGT GTGGTGGGTG AATTGCTTGA 240
GCCCAGAAGT CCAAGACCAG TCTGGACAAC ATAAGGAGAC CTTGTCTCTA CAAAAAAGTA 300
AAAAAATAGC CAGCCATGAT GGCTCACACC TGTAATCCCA GCATTTTGGG ATGCCAAGTT 360
AGGAGGATTT ATTGAGCCCA GGAGGTCAAG GCTACAGTGA GCTATGATTG TACCACTGCA 420
CTCCAGCCTG GGTGACAAAG TGAGGCTCTG TCTCTAAAAC AAAATTAGGT CAGGCACAGT 480
GGCTCACCCC TGTCATTGCA GCACTTTGGG AGGCCGAGAC AGGCTGATAA TTTGAGCCCA 540
AGAGTTTAAG ACCAGACCGG ACAATACGGC AAGATCCTGT TTCTTAAAAA AAAAAAAAAA 600
AAAAAAAAAA AAAAAAAAAA AGCCAGGCAT GGTGGTGCAT GCCTGTAGTC CCAGCTACTT 660
GGGAGGCTGA ACTGAGAGGA TCACCTGAGC CTGAGGAGGT CAAGGCTGCA GTGAGCCAAG 720
ATTGCACCAC TGGACTCCAG CCTGGGTGAC AGAATGAGAC CCTGTCTCAA AAAACAAAAT 780
AATTTTTTTT AAACAATAAA ATTAAAAAAC ATAAAATAAA ATTTTTTTTA AAAAGCCACT 840
ACCCACTTCT GATGGCCCAG CTGCTCCCTT GGGACCCTCC AGGCCTCTCC ATGCCCCAGC 900
ATGAAAGGAT TAACCTGGGT TCAATAGGGG GCTTCCCTGA TCCAGCTCTG GGGGCCATTG 960
TCCTTCCTGA CTGGTGGATG GCCCTGGCAA TATTTGGTGT TTTCCCTGGC TCTGCCCCAA 1020
TATCAATCCC TCCACCCATA AGTTCAGAGT CCTCAGAGAA GGGTATCCAT TTCACAGAAC 1080
TCCTATGCAT CCTTCAAAGC CCACCTTAAT GCCACTTCCT TCAGGAGGCC CTCCCAGATT 1140
TCTTCACCAC CCCCAGAGTG AATAGCTCCC TCCCCTCTGC CAAGCTCCCA GGTATCTTGA 1200
GCCATTCAGC ACACTTTGTT CTGATTCTCA CACTCAGGCC CTTCTCCCCC CATAGTGTGT 1260
GAGCACCTTG ATGCCAGAGA CCATCTTCCT CTCATCTTTG CAGCCTCAGT ACCAAGGGCC 1320
ATTATAAGCA CAGCGCAGAT TTCATGGAGT GGCTGAATGA TTTGTTTGCT GTGTGATCAC 1380
CTGTACTGAG TCAATATCGG TCACCTTTGG TCATGAGCAT GCCCCTTGAC CCAGATTCCT 1440
GCAGGAGCCT GCATATAGGG GCCCTGCTTG CTGGGACTGG GGATGGGGGT GGGGTGGGGA 1500
GTTCAAGGGA AGGCAAGGTC TAGGATATAA ATCCCAAGGG CGTGGGCTCA GCAGGGCCCG 1560
TTCTCATGCT TTCTGGCCCG GGAGGAGTGA TTCTCCATCT GGCAGGCCCA GCTGCAGTGC 1620
TGGGACAGGG ACATGAGCAG AGGCCACAGG AGGAGAGAGG GAGGTTGTGG GGGGAGCTCG 1680
GGGAAGCCCA TGGTAACCCG GGGGGAGGAA AAACAGCCAC 1720
|
