EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS091-19840

Organism

Homo sapiens

Tissue/cell

HepG2

Coordinate

chr17:41379150-41380500

Target genes

Number: 26
Name	Ensembl ID

MLX	ENSG00000108788
TUBG1	ENSG00000131462
FAM134C	ENSG00000141699
TUBG2	ENSG00000037042
VPS25	ENSG00000131475
WNK4	ENSG00000126562
CCDC56	ENSG00000183978
CNTD1	ENSG00000176563
BECN1	ENSG00000126581
PSME3	ENSG00000131467
AOC2	ENSG00000131480
AOC3	ENSG00000131471
RP11	ENSG00000260105
AC100793.2	ENSG00000213373
G6PC	ENSG00000131482
SNORA40	ENSG00000212149
AARSD1	ENSG00000108825
RUNDC1	ENSG00000198863
RPL27	ENSG00000131469
IFI35	ENSG00000068079
VAT1	ENSG00000108828
CTD	ENSG00000240828
NBR2	ENSG00000198496
BRCA1	ENSG00000012048
NBR1	ENSG00000188554
TMEM106A	ENSG00000184988

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Lhx3	MA0135.1	chr17:41379379-41379392	GAATTAATTAATT	+	6.29
Lhx3	MA0135.1	chr17:41379380-41379393	AATTAATTAATTA	-	6.78
Nr2f6(var.2)	MA0728.1	chr17:41379751-41379766	TGAACTCCTGACCTC	-	6.22
POU6F1	MA0628.1	chr17:41379381-41379391	ATTAATTAAT	+	6.02
POU6F1	MA0628.1	chr17:41379381-41379391	ATTAATTAAT	-	6.02
ZNF263	MA0528.1	chr17:41380442-41380463	TCTCCATTCCCTTCCTGCTCC	-	7.21

Enhancer Sequence

GAGTAGCTGG GATTACAGGT GCGCGCCACC ACGCCCGGCT GATTTTTGTA TTTTTAGTAG 60
AGATGGGGTT TCACCATGTT GGTCAGGCTG GTCTCGAACT CCTGACCACA GGTGATCCAC 120
CTGCCTTGGC CTCCCAAAGT GCTGGGATTA CAGGTGTGAG CCACTGTGCC CGGCTGGGAG 180
CAAGACTGGA GCAAGACTCC ATCTCAAAAA AAAAATAAAA TAAATAAGTG AATTAATTAA 240
TTAAAGGCCA GGCATGGTGG TTCACACTTG TCAACATTTT GGGAGGCTGA GGTGGGAGGA 300
TTGCTTGAGT CCAGGAGTTC CAGACCAGCC AGGGCAACAT AGTGAGACCC TGTCTGTATT 360
ACAATAATAA AATCAAATAA AGTTTTTAAT TTTTTTTTTG AGACAGAGTC TCACTCTGTC 420
ACTCAGGTCA GAGTGCAGTG GCACTATCTT GGCTCACTGC AACCTCCACC TCACTGATTC 480
AAGTGATTCT CATGCCTCAG TCTCCCCAGG TAGCTGGAAT TCCAGGCAAG CGCCACCATG 540
CCTAGCTACT TTTTGTACTT TTAGTAGAGA CCAGGTTTCG CCATGTTGGC CAGGCTGGTC 600
TTGAACTCCT GACCTCAACT GATCCACCCA CCTTGGCCTC CCAAAGTGCT GGATTACAGG 660
TGTGAGCCAC CATGCCCGGC CAAAATAACA TTTTTAAAAA CTAAATTAAA TTTATATAAC 720
ACTGACCGGG CATCATGGCT CATGCCTGCA ATCCCAGCAC TTTGGGAGGC TGAGGTGGGT 780
GGATCACCTG AGGTCGGGAG TTCGAGACCA GCCTCACCAA CATGGAGAAA CCGTGTCTCT 840
ACTAAAAATA CAAAATTATC TGGGCGCGGT GGCACATGCC TGTAATACCA GCTACTCGGG 900
AGGCTGAGGC AGGAGAATCA CTTGAACCCG GGAGGCAGAG GTTGTGGTGA GCCAAGATTG 960
CACCATTGCA CTCCAGCCTG GGCAACAAGA GCAAAACTCC ATCTCAAAAA AAAAAAAAAA 1020
AAAAAATTTG GTTCCTCAGT CACACTCCAA GGCTCAATAT AGCATACAGG CTGGGGGTTA 1080
CCCTATTGGA CAGAACATCT TTAAACCTCC CAGGCCTAGT ACCCTTGCCT TCCCCTAGAC 1140
TATTACAAGA GGGAAATTGA GTCAGCTGAT AGTGGTCCCC CCAACACAGA CACAGTCTAT 1200
CTGAGAGAAC GCCAAATGAC CTTGCTTTCC TCCTACCCCC AGCAAACAGC ATTCACCAAA 1260
TAGTAGGCAG CTTCCTAGGG ATCTCTCTCC ATTCTCCATT CCCTTCCTGC TCCAGAGAGG 1320
ACCCTGAAGA ACCCAGCCTA TCCCATGCAC 1350