EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS091-09245

Organism

Homo sapiens

Tissue/cell

HepG2

Coordinate

chr12:6494550-6495230

Target genes

Number: 28
Name	Ensembl ID

CD9	ENSG00000010278
RP1	ENSG00000256103
PLEKHG6	ENSG00000008323
TNFRSF1A	ENSG00000067182
LTBR	ENSG00000111321
SCNN1A	ENSG00000111319
CD27	ENSG00000139193
VAMP1	ENSG00000139190
NCAPD2	ENSG00000010292
MRPL51	ENSG00000111639
IFFO1	ENSG00000010295
NOP2	ENSG00000111641
SCARNA11	ENSG00000247853
CHD4	ENSG00000111642
COPS7A	ENSG00000111652
PTMS	ENSG00000159335
MLF2	ENSG00000089693
CD4	ENSG00000010610
LEPREL2	ENSG00000110811
USP5	ENSG00000111667
TPI1	ENSG00000111669
ENO2	ENSG00000111674
ATN1	ENSG00000111676
C12orf57	ENSG00000111678
SCARNA12	ENSG00000238795
EMG1	ENSG00000126749
PHB2	ENSG00000215021
LPCAT3	ENSG00000111684

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

SE_24888	chr12:6492424-6494880	Colon_Crypt_3
SE_33896	chr12:6493264-6494619	HCC1954
SE_34285	chr12:6491599-6495804	HCT-116
SE_34863	chr12:6491915-6494930	HeLa
SE_41677	chr12:6491857-6494872	LNCaP

Enhancer Sequence

AGGTCCCTGA GGGGCTGGAT GTGAAAAGGA GGCTGGGTGC CAGGGATCTC AAGTGGGAGC 60
AGGGAATATG GTACTGTGTC CACGGCGACC CCCCAGATCC TTGGCTTAAA ATTCCTCTTC 120
TCATTCCATG CAGAGGCTCA CAGAAGGGTT CTGGAGGGAC ATGGAACTGG GACAGGTGCA 180
GGGGACACAG GAGGTGGTTC TTCTCAGTAC TGGGAAGCTT GGGCAAAATG GTAGGCAGTA 240
GGCCGGGTGT GGTGGCCCAC GCCTGTAATC CCAGCACTTT GGGAGGCCGA GGTGGGCGGA 300
TCACGAGGTC AGGAGATCGA GACCATCCTG GCTAACACAG TGAAACCCCG TCTCTACTAA 360
AAATACAAAA AATTAGCCGG GCGTGGTGGT GGGCGCCTGT ATCCCAGCTA CTCGGGAGGC 420
TGAGGCAGGA GAATGGCGTG AACTTGGGAG GCGGAGCTTG CAGTGAGCCG AGATCGCGCC 480
ACTGCACTCC AGCCTGGGCG ACAGAGCAAG ACTCCGTCTC AAAAAAAAAA AAAAAAAAGG 540
CAGCAAAGCA GAGCTTGGGA AAGGTGAGAG CTACGCAATG GGGTGGATGG GCATCCTGAG 600
GCTTAAAGGA AACTCACAGG CCGGCAAAGG GCCCCTCCCT TTTGCCCATT CACCCTGGCT 660
GGCCTGCCTT TCTCTTGCCA 680