EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS091-08780

Organism

Homo sapiens

Tissue/cell

HepG2

Coordinate

chr11:116700660-116701280

Target genes

Number: 15
Name	Ensembl ID

BUD13	ENSG00000137656
AP006216.10	ENSG00000226645
AP006216.11	ENSG00000231611
ZNF259	ENSG00000109917
APOA5	ENSG00000110243
AP006216.5	ENSG00000236267
APOA4	ENSG00000110244
APOC3	ENSG00000110245
AP006216.12	ENSG00000235910
APOA1	ENSG00000118137
SIK3	ENSG00000231865
AP000936.1	ENSG00000234268
TAGLN	ENSG00000149591
PCSK7	ENSG00000160613
RNF214	ENSG00000167257

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263	MA0528.1	chr11:116700693-116700714	GGATGAAGAGGGGCAAGAGGA	+	6.36
ZNF263	MA0528.1	chr11:116700667-116700688	TGGGGAGGGGAAAGAGGAGGG	+	7.12
ZNF263	MA0528.1	chr11:116700684-116700705	AGGGGAGGAGGATGAAGAGGG	+	7.14
ZNF263	MA0528.1	chr11:116700687-116700708	GGAGGAGGATGAAGAGGGGCA	+	7.4

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_28896	chr11:116695808-116712530	Fetal_Intestine_Large
SE_35354	chr11:116695705-116702078	HepG2

Enhancer Sequence

TGCCCTCTGG GGAGGGGAAA GAGGAGGGGA GGAGGATGAA GAGGGGCAAG AGGAGCTCCC 60
TGCCCAGCCC AGCCAGCAAG CCTGGAGAAG CACTTGCTAG AGCTAAGGAA GCCTCGGAGC 120
TGGACGGGTG CCCCCCACCC CTCATCATAA CCTGAAGAAC ATGGAGGCCC GGGAGGGGTG 180
TCACTTGCCC AAAGCTACAC AGGGGGTGGG GCTGGAAGTG GCTCCAAGTG CAGGTTCCCC 240
CCTCATTCTT CAGGCTTAGG GCTGGAGGAA GCCTTAGACA GCCCAGTCCT ACCCCAGACA 300
GGGAAACTGA GGCCTGGAGA GGGCCAGAAA TCACCCAAAG ACACACAGCA TGTTGGCTGG 360
ACTGGACGGA GATCAGTCCA GACCGCAGGT GCCTTGATGT TCAGTCTGGT GGGTTTTCTG 420
CTCCATCCCA CCCACCTCCC TTTGGGCCTC GATCCCTCGC CCCTCACCAG TCCCCCTTCT 480
GAGAGCCCGT ATTAGCAGGG AGCCGGCCCC TACTCCTTCT GGCAGACCCA GCTAAGGTTC 540
TACCTTAGGG GCCACGCCAC CTCCCCAGGG AGGGGTCCAG AGGCATGGGG ACCTGGGGTG 600
CCCCTCACAG GACACTTCCT 620