EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS091-07518

Organism

Homo sapiens

Tissue/cell

HepG2

Coordinate

chr11:47459600-47460280

Target genes

Number: 19
Name	Ensembl ID

RP11	ENSG00000255520
ARFGAP2	ENSG00000149182
PACSIN3	ENSG00000165912
DDB2	ENSG00000134574
NR1H3	ENSG00000025434
ACP2	ENSG00000134575
MADD	ENSG00000110514
SPI1	ENSG00000066336
SLC39A13	ENSG00000165915
PSMC3	ENSG00000165916
RAPSN	ENSG00000165917
NDUFS3	ENSG00000213619
PTPMT1	ENSG00000110536
CELF1	ENSG00000149187
AC104942.1	ENSG00000231880
KBTBD4	ENSG00000123444
FAM180B	ENSG00000196666
MTCH2	ENSG00000109919
FNBP4	ENSG00000109920

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr11:47459653-47459671	CCTCTCTTCCTTCCTTGC	-	6.53
Zfx	MA0146.2	chr11:47460117-47460131	CCCGCCTCGGCCTC	+	6.01

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_65673

chr11:47458953-47460081

Pancreatic_islets

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH11I047437

chr11

47458954

47460081

Enhancer Sequence

GGGGAGGCAA AGGGCCCTGT CCACTCCCCT GAGGCCTGTC CTTCCCTCCG GGCCCTCTCT 60
TCCTTCCTTG CCTGCCCTCT GCAGGGGCTG GGATGCATCC TGGTGGCTGT TCAGCAGCAG 120
TGGAAGGGAA GGGAACGGTC CCCCCAGGCT CCCACTGCAC CCGGCTTGCC CCTCTCCTCC 180
TCTGCCCCAG GGACCTCCAG GGCAGAGCAG GGGCTGGGAG TTGAGAGGAT GGGATGGAAC 240
CAGACCCACG GCAGGTCTGG CCCTGGACGT CCGACCTAAT GACCTTTGAG GGGCCTCTCT 300
GACTCCTCTT TGGGGATTAT GAAAAGAATG GCCACAGATC TCAGCTCACT GCAGCCTCTG 360
CCTCCCGGGT TCAAGTGATT CTCCTGCCTC AGCCTCCCGA GTAGTTGGGA TTACAGGCTC 420
CCACCACCAT GCCTGGGTAA TTTTTGTATT TTTAGTAGAG ACGGGGTTTC ACCATGTTGG 480
CCAAGATGAT CTTGAACCCC GGGGCTCAAG TGATCAGCCC GCCTCGGCCT CCCAAAGTGC 540
TTGCGAGACA GACGTGAGGC ACCACGCCTG GCCAAGGTTA AGTGTTTGCT ATTAGTATTA 600
TTGCTGTGAT TAAGCCAGCT GGGCCCTAGA GTGCCCCGAA GAGATCCTGC CCACCCCTGT 660
CCACCCCCCC AGGAGCCCCC 680