EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS091-03800

Organism

Homo sapiens

Tissue/cell

HepG2

Coordinate

chr1:205585770-205587480

Target genes

Number: 6
Name	Ensembl ID

CDK18	ENSG00000117266
RP11	ENSG00000236942
ELK4	ENSG00000158711
NUCKS1	ENSG00000069275
RAB7L1	ENSG00000117280
SLC41A1	ENSG00000133065

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Ar	MA0007.3	chr1:205586010-205586027	AAGAACAACCTGTACCC	-	6.21
JUN	MA0488.1	chr1:205585915-205585928	AATATGATGTCAT	+	6.41
PHOX2A	MA0713.1	chr1:205586118-205586129	TAATTCAATTA	+	6.14
Phox2b	MA0681.1	chr1:205586118-205586129	TAATTCAATTA	+	6.14

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I205616	chr1	205585821	205585970
GH01I205617	chr1	205586141	205586290

Enhancer Sequence

AACTGAGAAA GAAAACAAAA CACATTATCA TCCTATTACT CAACCCCAAC TTTTACTTTC 60
TATCCTACTC TATTACCTGA GGCAAAACAC AACAGCCTTC TGTAATGGCT CACAGGACAA 120
AGGCAGTGGC TGTTTATCAT GAAAGAATAT GATGTCATAA CAAAAACTAG AAACAAAAAT 180
CTTTTGTCCT AACATATTAA ATATTAACAT TCTCCAACTT ACCTCAATGG AGTAGAAACA 240
AAGAACAACC TGTACCCTCC TTCATATCCT AAGGTACACA GGTTTACAAT TAACCTCAAA 300
TGAAGGTTTT AGAAAGTTCA AGTAAATGAC AATATGCACT ACAGAGTGTA ATTCAATTAT 360
GGAGCAAATC ATAAACCCTC AAAAAGAGAT CCAGAAAGGT ATAAATAGCA CTCATCCTAG 420
AAAAGGGTTC CCCATCAAGT ATTCTGAGGC CAGCTCTACA GGGAGATTCC AGGCTGAAGC 480
TACAGGAGCA CTATGACTTT GCTTAAGGTC TCAGCTGACT CTATAACTCA ATTATCTGCT 540
CATGTGTGGC AATGAAAAAA AATATGAAAA ATTCTCAACT TTTTTTTCTA TTCAATAATT 600
TTAAACGTTG GCAAAAAATA AAAAGCAGAG AGATTTTTAA TTTTCCTCTT TTTCCCTACC 660
ATTTCATTTC TAAAAGAATG AGAAGTTAAA TTACAAAATA TAAGAAAATC AGAGATAGTC 720
AACCATGAAT AAGTAAATGA ATTGACTCCA AGAAAGTCTT TAAGTTATAA CATCTAAGTG 780
TTTTGGGCAA AATAATGGCT AAACCCATTA GGAATGGCAA GAACTTTCCT AACGTCTTGG 840
TGAAGAGATA ATATTCATTT TTTTAAAAAT GTACATATAA AATGTTGATA AATTATCAAT 900
TCTGACTGAG GGAGAAATGG GACTGTTTGA TATACCATTT TCAAGACCTT TCTCTATTAA 960
AAAAAAAAAA ATGCTTGGGC CGCGTGCAGT GGCTCATGCC TGTAATCCCA GCACTTCGGG 1020
AGGCTGAGGC GGGCGGATCA CCTGAGGTCA GGAGTTTGAG ACCAGCCTGA TCAACATGAA 1080
GAAACCTCGT CTCTACTAAA AATACAAAAT TAGCCTAGCA TGGTGGCACA TGCCTATAAT 1140
CCTGGCTACT CGGGAGGCTG AGGCAGGAGA ACCGCTTGAA CCCAGGAGGC AGAGGTTGCA 1200
GTGAGCTGAG ATCGTGCCAT TGCATTCTGG CCTGGACAAC AAGAGCAAAA CTCCGCCTCA 1260
AAAAAAAATT TTTTTTAATC TTTAATTAAA AGAGGGAACC TATGTGCAGA GATCCCCCAT 1320
ATATGTGTGT GTGTGTGTGT GTGAGAGAGA GAGAGAGCAA GAGAGAGAGA GAGAGTGTGT 1380
GTGTGTGGAT TTTGTTTTTT TGAGACAAGG TCTCACTGTG TCACCCAGGC CGGAGTGCAG 1440
CGGTGCCATT ATAGCTCACT GCAGCCTTGA TCTACTGGGC TCAAGCGGTC CTCCCACCTC 1500
AGCCTCCCAA GTAGCTCTAG GGGCCACAGG CACGTGCTAC CATGCCTAAC TTAATTTTTT 1560
TTATTTCTAG TACAGACAAG GTCTCCTTAG GTTGTCCAGG CTGGTCTCAA ACTCCTGAGC 1620
TCAAGCAATC TTCCTGCCTC GGCCTACCAA AGCGCTGGGA TTACAGGCAT GACACACACA 1680
CTGCCTGGCC CATTTTTTTT TTTTAAATAG 1710