EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS091-03112

Organism

Homo sapiens

Tissue/cell

HepG2

Coordinate

chr1:156900410-156901700

Target genes

Number: 16
Name	Ensembl ID

SMG5	ENSG00000198952
C1orf85	ENSG00000198715
Y	ENSG00000206651
MEF2D	ENSG00000116604
IQGAP3	ENSG00000183856
APOA1BP	ENSG00000163382
GPATCH4	ENSG00000160818
BCAN	ENSG00000132692
RP11	ENSG00000229953
NES	ENSG00000132688
CRABP2	ENSG00000143320
RRNAD1	ENSG00000143303
ISG20L2	ENSG00000143319
MRPL24	ENSG00000143314
PRCC	ENSG00000143294
HDGF	ENSG00000143321

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

INSM1	MA0155.1	chr1:156900911-156900923	TGCCCCCTTACA	-	6.27
IRF1	MA0050.2	chr1:156901165-156901186	GTTGCCTTTCAGTTTCCATTT	+	6.6
IRF1	MA0050.2	chr1:156901506-156901527	CGTTACTTTCACTTTCTGGCT	+	6.93

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I156932	chr1	156901193	156901392
GH01I156931	chr1	156901593	156901792

Enhancer Sequence

TAAGTTGCCA GGAGGAGTGG AGGCAGGGGG CACACCCCTG GGATTCCAGG CTTGCCTGAG 60
ACGTCTCACC CCAGCCCCTC CTGGAATGTG GTCTCCAGCC CCATGCTGTG GCAGCAGCCA 120
TTTGCCTTCA AATTTGTCCT CCACTCCTGT CCCAACCTCA CCTGAAACCC CCTCCCATCT 180
CACCTTGGGC TTCTGTGGGA ATAACAAGAG CAGACCCCTT CTATTTTTCC TTGTCTATTA 240
GTAGCCCACA CTTTGGATCT GCTGTCTCAA CTCAGCCAGG CTACTTCCCC AGAGGCCCAG 300
AGGCACAGAG GCCCTCAGTT CCTCATCACC ACCTCCATCA CTTGCTTGGA CTGTTGCATA 360
GGAACAATGC GTCTTCTTTT TTGCCCCTCT CAGCAGCTCC CTGAGGAAGG CAGGGCATTT 420
TTATGGTCAT GGCACTGCCC CACGCTACCC TGTGCATGGG TCCTTCTTCA GACCCTCTCT 480
CTTTTGCCCC TGGATCTTCT CTGCCCCCTT ACAACCTGGA CCAACTTGCT GCTTGCATTG 540
GAAATCTTCC TGGGCTGCCT TCAGTGCTCT TATGGTCCCT CATCCCTCCG TTCTGTCAGC 600
TGCCTGAGCA TCCGCCTCTC TTTATTTTTC TCTTCCATTG GAAGACTCCC TGCACACCCT 660
AGGCAGGGAA GGGCCCCTCT CCTTTCAGGA GTCTTCTCTG GCACTCAAGA CAAAATCTTA 720
CAAAAGAGGA CGTTCAGAGG GAGGAAGAGA TTGGGGTTGC CTTTCAGTTT CCATTTTTCA 780
TCTCTGCCTC TGTCTTGATC AGGCTGCTGA TTGTACTAGG ACTACTGCAA TTTCTTTTCA 840
TCATGCCGTC ATTGTTACTT CCCTCCAATC CATTCTCCTC ATTGCTCTAG GTGTTGGGAA 900
ACACTTAGTA AAATCTGAAT GCGACATACT GTTTCACGCT TCCAGAGCCT TTGCACCTGC 960
TTTCTTTGCC TAGAACACCT TTCCCGTCTT CATCTGACAA TATCATGTGC GTTCACAGGA 1020
GGCCCTTCCT GGCCTGGCCT TTTCCGTGCT CCCACAGTGC TCTGAGCTTG CCTCTGTCAG 1080
CGCTCACTCC AGACCACGTT ACTTTCACTT TCTGGCTCCT CCACACAAAG GAGCTTCTTG 1140
AGGGTATGGG CTTATTTATT TTTGTATCCC CAGCACTTGG GACAAAGCCT GGACTATAGC 1200
CGGCAGTCAA AACATGTATG TTGAATGAAT GAATGAATGA ATGGCCTGTT GACCAGCTCC 1260
CCTGCTGTCT GCTGCAATTA GTATTCTGCT 1290