EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS091-03024

Organism

Homo sapiens

Tissue/cell

HepG2

Coordinate

chr1:155255760-155256960

Target genes

Number: 30
Name	Ensembl ID

PMVK	ENSG00000163344
PBXIP1	ENSG00000163346
PYGO2	ENSG00000163348
SHC1	ENSG00000160691
CKS1B	ENSG00000173207
FLAD1	ENSG00000160688
ZBTB7B	ENSG00000160685
DCST2	ENSG00000163354
RP11	ENSG00000232093
ADAM15	ENSG00000143537
EFNA4	ENSG00000243364
EFNA3	ENSG00000143590
EFNA1	ENSG00000169242
SLC50A1	ENSG00000169241
DPM3	ENSG00000179085
HMGN2P18	ENSG00000223452
KRTCAP2	ENSG00000163463
MUC1	ENSG00000185499
MTX1	ENSG00000173171
THBS3	ENSG00000169231
GBAP1	ENSG00000160766
MTX1P1	ENSG00000236675
GBA	ENSG00000177628
FAM189B	ENSG00000160767
SCAMP3	ENSG00000116521
HCN3	ENSG00000143630
CLK2	ENSG00000176444
PKLR	ENSG00000143627
FDPS	ENSG00000160752
RUSC1	ENSG00000160753

SNPs

Number: 1
ID	Chromosome	Position	Genome Version

rs12724449

chr1

155256231

hg19

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr1:155255927-155255939	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr1:155255931-155255943	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr1:155255935-155255947	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr1:155255939-155255951	GTTTGTTTGTTT	+	6.32
RREB1	MA0073.1	chr1:155256505-155256525	CCCCAAACCACCCACTACTC	+	7.54

Enhancer Sequence

CAGGCCTCAG GGAGGGTGGC AGGGTCACGA GCAGACAGTG GAGAGGGCAA CTGCTCCCAG 60
GCTCTGGGTC CCTGCCTCAG TACGCTGCAG AATCACAGAG CTCCAGCCCC TCCCCAGGCC 120
TACTCAGTGA GAATCTCTGG GCTGGGGTCT GGAGCTCTAT AGTTTTTGTT TGTTTGTTTG 180
TTTGTTTGTT TTTTGAGGTG GAGTCTCGCT CTGTTGCCCA GGCTGGAGTG CAGTGGCGCA 240
ATCTCGGCTC ACTGAAAGCT CTGCCTCCTG GGTTCACGCC ATTCTCCTGC CTCACACTCC 300
CGAGTAGCTG GGACCACAGG CACCCGCCAC CACGCCTGGC TAATTTTTTG TATTTTTAGT 360
AGAGACGGGG TTTCACTGTG TTAGCCAGGA TGGTCTCGAT CTCCTGACCT CGTGATCCGC 420
CCGCCTCAGC CTCCCAAAGT GCTGGGATTA CAGGCGTGAA TCACCGTGCC AGGCCTGAGC 480
TCTGTAGTTT TTAAAGCTTC TCAGGAGATT CTAATGCACA GCCAGGTTGC AAACTACTGG 540
GCCAGAGGGC CTTTTAGAAC CCTTAGACAG TGAAATCCAA GGATCCTATG AGATGAGGGA 600
AAGGCAGGAG TGAAGCAGAG CTGTCCTGGA GCATAAGCTT TTTGGAGCTG CCTGGTGGCG 660
TGTTTCAGGG ACCCAGCCTG TGGCAGTAGG GGCAGTTCAG CCTTCCACTG CCCAAAGTGA 720
CCTGAGGCTT ATATAATCTC TCAGTCCCCA AACCACCCAC TACTCCCATC ATGTTGCACT 780
TTGCTCTTTG ATACTGCTTT TCTCCTTCAG GGCTGCCCTC AGTGTTTATT CAAGGGGGTG 840
GGAGGGGTGG GTACACTGAG TTGCCCAGGT CTACCTCTTG GGATTGAGCA GTCGGGGAGG 900
GGTGGGAGTT AAAGTGGAGT GGAATCACTG GGAATTTAGG GCCAGCAAGA CCTGCCTGGT 960
CATCAGCCTT CATATGGAGA GAGTAGGAAG GACAGGGAGC AGTAACCCAG TAATTGTGGG 1020
GGTCTGGAGA AAGACAATGC TTGGGGTGTT TAGGGTTCCT GGGGCACGGA GGTAATAGGT 1080
AATCAATGGT TTCTCCCAAG TCTAGGGAGG AGCCTTAGAA AGTTGGGTCC ACTGCTGCAG 1140
GCTCAGCAAG AGGAGTTCTG GGGACAAGGA CGGGGTTCTG AAGCTTCCTC CCAATTTCTG 1200