EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS091-02950

Organism

Homo sapiens

Tissue/cell

HepG2

Coordinate

chr1:153740300-153741360

Target genes

Number: 18
Name	Ensembl ID

S100A6	ENSG00000197956
S100A16	ENSG00000188643
S100A14	ENSG00000189334
S100A1	ENSG00000160678
CHTOP	ENSG00000160679
S100A13	ENSG00000189171
SNAPIN	ENSG00000143553
RP11	ENSG00000235015
INTS3	ENSG00000143624
snoU13	ENSG00000238511
SLC27A3	ENSG00000143554
DENND4B	ENSG00000198837
CRTC2	ENSG00000160741
CREB3L4	ENSG00000143578
SLC39A1	ENSG00000143570
JTB	ENSG00000143543
RAB13	ENSG00000143545
RPS27	ENSG00000177954

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

REST	MA0138.2	chr1:153740575-153740596	ATCTGGACCCAGGACAGATCC	+	6.4
Stat6	MA0520.1	chr1:153740787-153740802	AGTTCCCAGGAAGAG	-	6.18

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_01713	chr1:153739652-153741202	Aorta
SE_10027	chr1:153739980-153742699	CD14
SE_32051	chr1:153739681-153742597	Gastric
SE_42308	chr1:153739733-153751166	Lung

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I153767

chr1

153739671

153742076

Enhancer Sequence

GAGGTCAGTG CCTGCATCCG TATCTGTGCC GGGGGGCTCA CAGGAACACA CCTCAGTGAA 60
CACTCTGAGT ACACACAACC CTGAACCCTC TTTTGTTCAT CCCCACTAAC CTAGGTGGGC 120
CATTGCTTCC CACACTCACA GCTGTCCCCT CCTTCCACTT CTCTTTATTA GTGGTTGAAA 180
CATTTCTAAA ACTCCCTGAA TTCCTATACT TTGGTGTAAC TGATGTGCGT TGGGGTCTGA 240
GCCTATATAC TTGGCTTCTC AGATTGGGCC CCATCATCTG GACCCAGGAC AGATCCCACA 300
AACCAGATCC ATGTTCATAT GTCCCAGGCC CTCTTGTCCT CTGATGGCTC ACCCTTGCTT 360
GGATTCTCTC TGATAGTTCC TGATGACCAG GGCTTCTGTA GTGGAGACTC ACTTTCATTT 420
CCCCTGGTTC ACTCACACTC TAGGAACTGG GACATAACAG GTATCGGCCC TTTCTCCTCT 480
TGGTAGAAGT TCCCAGGAAG AGGGAAATAA GGACCCAGGG CATGACAGGA GGAACTGTGA 540
TCTCAGCCGA GTACTGGAGG GAGGAGGGGT GCAGATCCTG GACACAGGGT ACTTTCCTCC 600
CCCTTCTCTA GATGAGGCCC TGCCTACCCC ACACACCTCC AGACATAAAC TCTCTACACC 660
ACCTCTTTGG CCAAAGGTCA GCACAGGTTG GACTTCTTTG CTGCCAGGGA TGCAAATATT 720
TATTCTACCA CTGCTCCCAC ACAGAATCAG CCACCATGGC CAGTCCTCTC AGCTCTGGCT 780
TTATCTCTAG TAGTTCCCCA TTCCTTTCTG TACACACATG CTTTGGGAAG TATCAGAGAA 840
AACCCACACC CCTGATGGTG TGCACACATA AATAACAAAA CTTGGGGGCT TCAAGTTCTT 900
GAAGTCTTCC AGCATCATAG CTGTTGGATC TCTGTTTAGG GGTTTATTTT AGGGCCTGTG 960
TCTGGCTGAC CCAGTCAAAC CTTGAGATGT AATAAGGAAG GAGAGTGGGC TATGGGATAA 1020
AAGCTGAGGA GCCCATCCAG GACTCTTCCC CTCTCTTTTT 1060