EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS091-01541

Organism

Homo sapiens

Tissue/cell

HepG2

Coordinate

chr1:45165280-45166590

Target genes

Number: 13
Name	Ensembl ID

TMEM53	ENSG00000126106
RNU5F	ENSG00000199377
RNU5D	ENSG00000200169
KIF2C	ENSG00000142945
RPS8	ENSG00000142937
RP11	ENSG00000225721
SNORD46	ENSG00000200913
BEST4	ENSG00000142959
PLK3	ENSG00000173846
TCTEX1D4	ENSG00000188396
BTBD19	ENSG00000222009
PTCH2	ENSG00000117425
RP5	ENSG00000226499

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOSL1	MA0477.1	chr1:45165402-45165413	CATGAGTCACC	-	6.62
FOXF2	MA0030.1	chr1:45166427-45166441	CTAAGGTAAACAAG	+	6.36
JUND	MA0491.1	chr1:45165402-45165413	CATGAGTCACC	-	6.02

Enhancer Sequence

CTGGCTAATT TTTGTTATTT TTAGTAGAGA CGGGGTTTCG CCATGTTAGC CATGGCTGGT 60
CTCAAACTCA TGAGCTCAAG CGATCCACCC ACCTCGGCCT CCCAAAGTAC TGGAATTACA 120
GGCATGAGTC ACCGCACCCT CAATAATTTT AATATAGTCC ATGAAGTGAG GCATGTAAAA 180
GAGATGCCAT CCCCCACATC TCCCTTTTTC CTTTTCTTTT TCTATTTTTT TTTTTTTTTG 240
AGTTGGAGTC TCGTTCTGTA GCCCAGGCTG GAGTGCAGTG GCACGGTCTC AGCTCACTAC 300
AACCTCCACC TCCCGGGTTC AAGCGATTCT CCTGCCTCAG CCTCCCCAGT AACTGGGACT 360
ACAGGCGCGT GCCACCAGAC CCAGCTAATT TTTGTATTTT TAATACAGAC AGGGTTTCAC 420
CATGTTGGCC AGGCTGGTCT CGAACTCCTG AACTCAAGCC ATCCACCTGC CTTGGCCTCC 480
CATAGTGCTG GGATTACAGG CGTGAGCCAC AACGCCTGAC GAACATCTCC CTTTTTCAAA 540
GCACTTCCCA CCCTGCATTC TCATCAAGGT TCTCCTGCCT GTCTACCCCA TGGCCTCTCG 600
AAGCCTCAGT GTCTTCATCC ATAAAGCGGG AGAAACACCT TCCTCTTGGT ATGGTTTCTG 660
GGATTAAGTG AATTAGTATT TGTAAAACCA TTTTGCAAAC TGCTGAGTGC TATACAAGTG 720
TTATCATGGC CGGGCGCCGT GGCTCACGCC TCTAATCCCA ACACTTCGGG AGGCCAAGGT 780
GGGCGCATCA CGAGGTCAGG AGATAAAGAC CATCCTGGCT AACACTGTGA AACCCTGTCT 840
CTATTAAAAA TACAAAAATT AGCCAGGCCT GGTGGCACAC ACCTGTAGTC CCAGCTACCT 900
GGGAGGCTGA GGCAAGAGAA TCGCTTGAAC CTGGGAGGCA GAGGTTGCAG TGAGCCGAGA 960
TCGCACCACT GTACTCCAGC CTGGGCAACA GACAGAGACT CCATCTCAAA AAAAAAAAAA 1020
AAAAAAGAGT TATCATATAG CAATAAAAAA ATGCATGTTT TATTTGTAAA TTGTGCAGAG 1080
CCATTTTAAA CTTTAAAACA GATTTTGACA TGCCTATGCT GAAATAAAAT CCTCCAGCCA 1140
CATAACTCTA AGGTAAACAA GACAGTGATG CAACATGAGA ACCAGGCCTC AATTTTGCTT 1200
TGGTTGAACA GGCTTGGTTG AAGAGCTTTT AATCCTATTC ATATTATATA ATCTTGAGTG 1260
GGGATTTTTT CATAAATCCC TTCCAATTTA GCATTTCCTC TCTTCTTTGC 1310