EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS091-01507

Organism

Homo sapiens

Tissue/cell

HepG2

Coordinate

chr1:44399930-44401260

Target genes

Number: 14
Name	Ensembl ID

ST3GAL3	ENSG00000126091
RP11	ENSG00000236200
SHMT1P1	ENSG00000224751
ARTN	ENSG00000117407
IPO13	ENSG00000117408
DPH2	ENSG00000132768
ATP6V0B	ENSG00000117410
B4GALT2	ENSG00000117411
CCDC24	ENSG00000159214
SLC6A9	ENSG00000196517
RP5	ENSG00000230615
AL139220.1	ENSG00000239560
KLF17	ENSG00000171872
DMAP1	ENSG00000178028

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr1:44400586-44400605	CTCTGCCCCCTTGTGGCCA	-	7.23
Nr2f6(var.2)	MA0728.1	chr1:44401008-44401023	TGACCTTGTAACCTT	-	6.23

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_36897

chr1:44394542-44403558

HMEC

Enhancer Sequence

TGGTGAGTAG CGGGCTGGTG GATGGGGAGG CAAGGGCCAG AGAACCAAAT GGCCCTAGAC 60
CACAAGGAGG TAGGAGGCAG GGCCTGAGCT GCCCTCAAGA GACCTGCTCC CGGGCTCCCC 120
CTAGCGCAGA GGGCTCCTAA GGCTGCCCTG CCTGCCTTTC CCTCCATCAC GGACAACAGT 180
CACTGGCCTG GCTCGGAGGC CTTGATTCCA CTTAGCCAAG AGGCACACAC CAGGACCTGG 240
AGGACAACCC CGGGAAGGCC TGGGGGTCTG TTCCACAGGT GTGCAGGCAT TCTGTGTGCT 300
AAAGGATGGG GATGAGGGTG GTAGCTGGGA CCCAAGAGGA GGCTGGCTAA TGAGGACTTA 360
CGAAGGCTCT AGGGCCCCAA AAGGGTGTTT GGGAGTGCTA GCAGTGGGAG CTCAGGAAGG 420
CTGGCTGGGA TCAGGAACGA TGGCTCAAGG GGGAAACTTC TAGGAGCATG ACTAGGCTGC 480
CAGATCCATA GGAGGCTGGG AGGGGGACAG ACCTAGACCA GCTCCCAGGG TGGCTCAGCT 540
CTCAGAGACC AGGCTGGTAT GGAAGCCTAG CTGGCCCTCC TGGGAGTGGC TCAGGCCTGA 600
GTGTAGCTGA GGGGATGGAA AAGCCCACCC TGCTTGGAAT CTGCAGGCTT GGCAGACTCT 660
GCCCCCTTGT GGCCACAGGA AGCCATGACC CAGGCCCCAT GTTTTCAGAG GGCCCATTAG 720
CTCCCACCAT CCCCCGGCTC TGTGGTCATC GAGGGACACC TATAGTCAGA GGAGAGAACT 780
CAGGTGGCTC TGGGTCCAGA ACACAGTTCA CAGAGGGGCG AGGTGAAGCA GCTCTGGGTG 840
GGCAGCACAG GCTGAGGCTT GGGGCTCACT ATCATTAGAT AACTCTTAGA GTGACCAGCT 900
AGCACCCTAA TTCTTCTCCA GCCCTCAGCT TCCTCTCCGG CAGCCTGGGG TGAAGGCCTC 960
TGTAGGACCA AGTGTGTCCA GCTATAACTC CTTCCAGCCA CTTCTGGCAT CTCCAGACCT 1020
ACAACGCAGA GCAGGAAGGT TCTGGGAAAA GAGGACCCCT CTCTCCCCTC CAGCTGTGTG 1080
ACCTTGTAAC CTTAGACAAC CTCTGAGCTT CTCTGAGCCT TGTTTGCTCA TCTGGAAAAA 1140
GGGGATTAAA CCATTTACCT CATGGAGTTG TGAAAGAATA GCTGCAAAGC ACCTAACACA 1200
TAGTAAGGTT CCCAGTGCAG CTACTTCTGC TGGGTTGAGT CTAGCTGTGT AGGCCCCTTG 1260
TTCCTCACCT GGAGAAACTG GGGTGGCAGG CCGGTCCCCC ACAAAAGATA ACTCATCTCT 1320
TAATTTGCAA 1330