Tag | Content |
---|
EnhancerAtlas ID | HS091-00919 |
Organism | Homo sapiens |
Tissue/cell | HepG2 |
Coordinate | chr1:26221080-26223600 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr1:26222064-26222083 | CCGCCTCAAGGGGGCAGCA | + | 6.12 | HNF1A | MA0046.2 | chr1:26222568-26222583 | AATTAATGAGTAACA | + | 6.33 | IRF1 | MA0050.2 | chr1:26221212-26221233 | ATTTACTTTCATTTTTTAATT | + | 6.77 |
|
| Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
SE_03348 | chr1:26222021-26223614 | Brain_Angular_Gyrus | SE_04754 | chr1:26221685-26228407 | Brain_Anterior_Caudate | SE_05300 | chr1:26221344-26235071 | Brain_Cingulate_Gyrus | SE_06612 | chr1:26221152-26230525 | Brain_Hippocampus_Middle | SE_07163 | chr1:26221197-26235018 | Brain_Hippocampus_Middle_150 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I025888 | chr1 | 26215117 | 26223131 |
|
Enhancer Sequence | GGATTGCTTG AGCCAAGGAT GTTGAGGCTG CAGTGAGCTG TGTTTGCACC ACTGCACTCC 60 GGCCTGGGTG ACAAAGAGAG AGACCCTGTC TGAAAAAAAT TCTAGACACT GGGGCTCCAA 120 TTTTATTTTT TTATTTACTT TCATTTTTTA ATTATTTAGA GACAGAATCT TGCTATGTCT 180 CTAAATAAAT AAGGCTGGTC TCTAACTCCT GGCCTCAAGT GATCCTCCCT CCTCGGCCTC 240 CCAAAGTGCT GGGATTACAG GTGTGTACCA CCACACCCAG CAACAGGCTG GCTCCAATTT 300 TAGAAATTCT ACCTCCAAAG GTCTGAGGGT CCTGAGTCTC ATATTTTGAA AAAGTACCAT 360 GTGATCCTGA TACCCAGCTG GTGTCTGGCC CATAGAGGTG CCAGCAAGTG TTTGGTGACT 420 GGGCTTAGAG GTACAGTACA TCTCTGGAAG GAGACACGGG AGACAGCTAG GTGACCTGGG 480 AGGGAGGGAG ATTCACTTTT ATTATACGTC TTTTTTTTTT TTTTTTTTTT TGAGACACAG 540 TATCGCTCTG TTGCCCAGAC TGGAGTGCGG TGGCGTGATC TATGCTCACT GCAACCTCTA 600 CCTCCCGGGT TCATACCATT CTCCTGCCTC AGCCTCCCGA GTAGCTGGGA CTACAGGCAC 660 CCGCCACCAC GCCCGGCTAA TCTTGTTTTT GTATTTTTAG TAGAGACGGG GTTTCACCGT 720 GTTAGCCAGG ATGGTCTCAA TTTCCTGACC TCGTGATCTG CCCGCCTCGG TCTCCCAAAG 780 TGCTGGGATT ACAGGCTATT ACACGTCCTT TTATACTGAC TGGACTTTTG ATCTAAAAAA 840 CAGTTTGGCT GACTTGGAGT GATGGAGTTA CTAGTCTCTG TGTCAGGGAC TGCAAATGCT 900 GGGCCTCCAG CAGGGGCAGG GCGGATCCAG CGAAAGACAG AAGTGGGTGG GCCCAAGGGG 960 ATGGAGAGCT GCAGAACACA AGTCCCGCCT CAAGGGGGCA GCAACTGCCC AGAGTCCGCT 1020 GACGGCCGCT GGGTGGGACT GCAAGCCCAG GGTTGCCAGA TCTGTCAGCT TTTTTCAAGA 1080 TAAGCTTGAA ATCAGATTTT CACATGGAAT TGTCAGCTAA TTCAACAATT TAAAACACAG 1140 CATGGGCTGA ATGCAACATG CCTATGGTTC AACATTGGCT GCAGGCCACC AGTTTGTGCG 1200 TTCGGATCCA GGAGGATTCC ATTAAGGATT GTGCACCTCA GAGCCATCTG CAAAGCTGGT 1260 GCAGACCCTT CATTTGCTTC TAGAAAATCG GGTTTACTCC ACATGGGGTC CGCAAAGGAT 1320 GAGGACAAAG CCAGTGCCCT GAGGTAGACC GTGGGAGTCA CCCACCCACT CATCATTATT 1380 TAATCCAGCA CATTAACCTC CCACCACGAG CCAGGAGATC CAGTGGTGAA TGTGACAGGA 1440 GGAGTCCCTG TTTTCAGGGA CCCTGTGTTC TAGCTGGGGA GACACTTGAA TTAATGAGTA 1500 ACACTTGTGA TACATGAGGA GTTGCAGTAC AGCATGGGGG TTAAAAGTCT GGGTTTGAGT 1560 CCTGACTCTA CTGCTTGCTA GTTGTCATTT TAGGTAAATC CCCTAATCTA GGTCCAGTTG 1620 CCTTACTTCT CGCCTATGGA ATGGCCATGA TAACCTCATA GGGCTGTTCT GGGGATTCAC 1680 TGAGACAATG CAAATAATTA TTAGTTGCTG CTATTAAATA GAGAGCTGTG AGAGCAGGGA 1740 AGAGGGGAGG CTAGGCTTAG CATGGGGACT TCCCCATCCC AGTGAATACT GGGGCTTTCT 1800 GCCAGTGAGG GGAGCAGGAG GCCACAGGGA TTGGAAGCTC CAGGCCCAGG AGAGGCTCAG 1860 TCCTTTTCTG CTGAGATGGC TGCTATGAGG TAGCTGGCTC ATTTCCTGTC TGTTTTTTCT 1920 TCCTATGGAT CCAATTTCAG CAGCCTACTT GTCTCAGTAG GATATGGTGC CCAAGGACTG 1980 GGCAGGTACT GCTCTGCTCT TGGCCACGAT GGAAGCAGGC CAGGCCTTTC TAACTATGAA 2040 CCAGAGCCCT TCCATGAAGC TGCTGCATTT TGGAGCTCAT CAAACCCTAC AACTAAGTTT 2100 TAAAAATCTA AGTGCATGTA CGAAACAAGT CAGAAACCCT TTCCTACGCC CTTAAGTACA 2160 GAATACCAGC TTCTGCTGGC AGAGGCCTCA GCCACAGGGA CATTTTGGAC CTTCGTTTCA 2220 CCTGGGCAAA AAGGGAGGAG GCAAGTGTCA AGAGACTTGG CTCACCAGCA ATGTGTCTGG 2280 GTCCTTGGAG TTCAGCTCTG TGTCTATGAC ATGGTCTCTG ATCTCAGGTG GTCTGCAATC 2340 CAACCCTGTA GAGAATCAGT CTTGGATTTG GAAGGGAACT TCTAGGGCAT CTAAGTCCAA 2400 CCTCCATCCA AAGGGGGAAG CTTTTCTATA AGAAACTTGG CCTTGCCAGG CGCGGTGGCT 2460 CATGCCTGTA ATGCCAGCAC TTTGGGAGGC TGAGGCAGGC AGATCATGAG GTCAAGAGTT 2520
|