EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS091-00103

Organism

Homo sapiens

Tissue/cell

HepG2

Coordinate

chr1:2124420-2125070

Target genes

Number: 7
Name	Ensembl ID

GNB1	ENSG00000078369
TMEM52	ENSG00000178821
PRKCZ	ENSG00000067606
RP11	ENSG00000182873
C1orf86	ENSG00000162585
AL590822.1	ENSG00000203301
SKI	ENSG00000157933

dbSUPER

Number of super-enhancer constituents: 10
ID	Coordinate	Tissue/cell

SE_28207	chr1:2123182-2126199	Fetal_Intestine
SE_29530	chr1:2123139-2127849	Fetal_Intestine_Large
SE_40333	chr1:2124747-2126026	K562
SE_46689	chr1:2124704-2125774	Ovary
SE_47622	chr1:2124704-2125205	Pancreas
SE_54645	chr1:2120364-2127955	Stomach_Smooth_Muscle
SE_62490	chr1:2120386-2191742	Tonsil
SE_68393	chr1:2120436-2162432	TC32
SE_68394	chr1:2120436-2162432	TC32
SE_69135	chr1:2124723-2127875	H9

Enhancer Sequence

GACCAGGGGC ATCAGGCATG ACTGAAGGAC CTGGTCTCCA TAAGCTCTGA AACCTGCCGC 60
CCATTAACTC AACCAAAAGT TACGAACCAG CATCATTCAC ACCACCCCAG CCCCAGGACC 120
TGCTCCGGAG GCCAAGGGCC CAGAGGTCGC CAGACACAAG GCCAGGCACT GGGCAGTTTG 180
GGTTATCTTG TTAGCAAAAC TGGGTTCCAT TCCCCTTTAC TTAAAAAATA CATAAAAATA 240
TACGTTGGGT TTCAAAAATA AGAAAAAGCA TCTCCAGACA AAAAAGACGA TCTTCATTTT 300
TAAAACCCAT GACGCACTCT CGGGAAGGTG TTCCTGTGCT CTGGGCCTGG GGACGCTGGT 360
GCCACCAGAT TCCAGGATGG CCAGGTGGAC CCGGGGCCAG TGCTCCCAGC CTTCCTTCTG 420
TGCTGTTCTG TGGGCCCCCA GCCTGCCCTG CCCACAGAGC ACGGCAAGCA GGTGGACCCC 480
AGACCCGTGA CAGAGAGCCA CCTGGACATG CCAGGCCACA GCACTGGGCC ACCTTTCCAG 540
TGTGAAACAG GGCTTTAAAA GCCAGCGCTG AGCTCGGCCA CCTCTTGACC TTCTGAACGG 600
CTGTGGTTTC CAAACACGGA TGGATAACCG GGCCGGGCGC AGGGGTGGCC 650