| Tag | Content |
|---|
EnhancerAtlas ID | HS089-08259 |
Organism | Homo sapiens |
Tissue/cell | Hela |
Coordinate | chr20:47383880-47384570 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| GATA2 | MA0036.3 | chr20:47384144-47384155 | TTCTTATCTGT | + | 6.14 | | Gata1 | MA0035.3 | chr20:47384144-47384155 | TTCTTATCTGT | + | 6.62 |
|
| | Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
| SE_03860 | chr20:47382832-47386797 | Brain_Anterior_Caudate | | SE_04767 | chr20:47384074-47386851 | Brain_Cingulate_Gyrus | | SE_05768 | chr20:47382378-47387025 | Brain_Hippocampus_Middle | | SE_06681 | chr20:47383102-47384225 | Brain_Hippocampus_Middle_150 | | SE_07719 | chr20:47383716-47386380 | Brain_Inferior_Temporal_Lobe | | SE_09151 | chr20:47371448-47384981 | CD14 | | SE_11697 | chr20:47372452-47388108 | CD20 | | SE_12281 | chr20:47382955-47385081 | CD3 | | SE_14588 | chr20:47382873-47387101 | CD4_Memory_Primary_7pool | | SE_16488 | chr20:47383441-47385146 | CD4_Naive_Primary_8pool | | SE_18054 | chr20:47381442-47388271 | CD4p_CD25-_CD45ROp_Memory | | SE_18819 | chr20:47382690-47388059 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19386 | chr20:47382668-47387341 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20065 | chr20:47381307-47389626 | CD56 | | SE_21439 | chr20:47383260-47387291 | CD8_Memory_7pool | | SE_22493 | chr20:47382522-47387893 | CD8_primiary | | SE_33505 | chr20:47381210-47384027 | H2171 | | SE_42516 | chr20:47382707-47384709 | Lung | | SE_50554 | chr20:47383418-47384673 | Sigmoid_Colon | | SE_59612 | chr20:47363420-47493230 | Ly4 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr20 | 47383939 | 47384393 | | chr20 | 47384107 | 47384389 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I048757 | chr20 | 47373828 | 47387472 |
|
Enhancer Sequence | AGGGAGGGGA GATGATGGAA CCAGAGAAGC ATGAAGAAGC CCCCTCAAAC GAGGGCCCTG 60
AAGAGGGGAT GGCTGAGAGC TGGAAGATGG AGGTTCTGGT GTCAGACAAG CTGGTTCAAG 120
TCCCCACCTG TCAGCGGGGG AGGGTACGTG GGCCTCTGAA CCTCAGTTTC CACCTAACTC 180
AGAGAAGGAA ATAGATAACG AACCCTAACT TCAGAGTCGC ACCAGAGTGA AATGCCAACG 240
CTTACGTTAC CATCACTGAT GGGGTTCTTA TCTGTCAGTG CATCGACGTA AAAGCAGCCC 300
TCTCCAACTA CAGACCACGC TGTACTTTCC CGACATTTCC CCAGAGTCGT GTGTCTCATT 360
CCACTGCAGC CCCAATGCCT AGTCTGCCCT TCCTAGGTCA CCCCAGGCTT TTTCTTACCT 420
CAGGGACTTT GCACGTGCTG TTCCCCGCCC CTCATCGTCA CTGCACAGGA TGCTCAAATA 480
TCACCTCCAC AGAGAGCCTC CCCTGACCAT CCTGGCTGAA GCAGCCTCAC CCAAGCCACA 540
AGTCGCCCCC GAGCCACCCT CTACCTCGAT AATCTGTTTT AATTCCCTGT AATGCAGGTA 600
GCACAAAGTG TTGTTCTATG CATTTTGCTA ATTTAGAGTC CTCCTCTCTG CGCACTGCCA 660
GCTCCGTGAT GGTGAGGGTC TCTGGCTGCT 690
|
