EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS089-03034

Organism

Homo sapiens

Tissue/cell

Hela

Coordinate

chr12:7189410-7189930

Target genes

Number: 30
Name	Ensembl ID

RP1	ENSG00000224906
GAPDH	ENSG00000111640
NOP2	ENSG00000111641
COPS7A	ENSG00000111652
PTMS	ENSG00000159335
MLF2	ENSG00000089693
LEPREL2	ENSG00000110811
CDCA3	ENSG00000111665
USP5	ENSG00000111667
TPI1	ENSG00000111669
RPL13P5	ENSG00000240370
LRRC23	ENSG00000010626
DSTNP2	ENSG00000248593
ENO2	ENSG00000111674
ATN1	ENSG00000111676
C12orf57	ENSG00000111678
RNU7	ENSG00000238923
PTPN6	ENSG00000111679
SCARNA12	ENSG00000238795
EMG1	ENSG00000126749
PHB2	ENSG00000215021
U47924.19	ENSG00000255896
C1S	ENSG00000182326
LPCAT3	ENSG00000111684
RP3	ENSG00000239701
C1R	ENSG00000159403
ABC12	ENSG00000205885
C1RL	ENSG00000139178
U6	ENSG00000200345
RBP5	ENSG00000139194

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF4G	MA0484.1	chr12:7189530-7189545	AAGGGCCAAAGGTCA	+	6.73
NR2F1	MA0017.2	chr12:7189536-7189549	CAAAGGTCAAAGG	+	7.22
Nr2f6(var.2)	MA0728.1	chr12:7189530-7189545	AAGGGCCAAAGGTCA	+	6.05
Nr2f6	MA0677.1	chr12:7189531-7189545	AGGGCCAAAGGTCA	+	6.56
Rxra	MA0512.2	chr12:7189531-7189545	AGGGCCAAAGGTCA	+	6.18

Enhancer Sequence

CTGAGGGCAG AGGAGGCAAG AATCAAGTTG GGGGGTGATG GGTAAGAAAA CTAGGTTGCA 60
GAGGCCAGCA AGTACTGAGT GTGCTTGATG GGGAGAGGGG CAGGGAGGAG CCAACATGGC 120
AAGGGCCAAA GGTCAAAGGC TCAACTCTAG AAGGAAAGAA TGTCAAGTGT TCAGAGGCTC 180
TAGACCTATA TTTTGTTTTA ATGCCAAGTA AAAAAATCAG AATGCTTAAC TATTTTTTTT 240
TTTGGGACGG AGTCTCACTC TGTTGCCCAG GCTGGAGTGC AGTGGCGCAA TCTCGGCTTA 300
CTGCAAGCTC CGTCTCCCAG GTTCATGCCA TTCTCCTGCC TCAGCCTCCC AAGTAGCTGG 360
GACTACAGGT GCCCGCCACC ATGCCCGGCT AATTTTTTGT ATTTTTAGTA GAGACAGGGT 420
TTCACCGTGT TAGCCAGGAT GGTCTCGATC TCCTGACCTC GTGATCNNNN NNNNNNNNNN 480
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 520