EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS089-01019

Organism

Homo sapiens

Tissue/cell

Hela

Coordinate

chr1:156130000-156130230

Target genes

Number: 27
Name	Ensembl ID

RP11	ENSG00000234937
GON4L	ENSG00000116580
SYT11	ENSG00000132718
RIT1	ENSG00000143622
SNORA42	ENSG00000207475
SCARNA4	ENSG00000252808
KIAA0907	ENSG00000132680
ARHGEF2	ENSG00000116584
SSR2	ENSG00000163479
UBQLN4	ENSG00000160803
LAMTOR2	ENSG00000116586
RAB25	ENSG00000132698
AL355388.1	ENSG00000222611
MEX3A	ENSG00000254726
LMNA	ENSG00000160789
SEMA4A	ENSG00000196189
SLC25A44	ENSG00000160785
PMF1	ENSG00000160783
BGLAP	ENSG00000242252
PAQR6	ENSG00000160781
SMG5	ENSG00000198952
TMEM79	ENSG00000163472
C1orf85	ENSG00000198715
VHLL	ENSG00000189030
C1orf182	ENSG00000163467
CCT3	ENSG00000163468
IQGAP3	ENSG00000183856

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263	MA0528.1	chr1:156130208-156130229	TCTCTTCTCCTCTCCTCCACC	-	6.17
ZNF263	MA0528.1	chr1:156130205-156130226	TTCTCTCTTCTCCTCTCCTCC	-	6.3

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_04119	chr1:156129914-156130901	Brain_Anterior_Caudate
SE_05125	chr1:156129057-156130951	Brain_Cingulate_Gyrus
SE_05929	chr1:156129458-156131995	Brain_Hippocampus_Middle
SE_07183	chr1:156130014-156130982	Brain_Hippocampus_Middle_150
SE_08091	chr1:156129841-156132079	Brain_Inferior_Temporal_Lobe
SE_42123	chr1:156129614-156130971	Lung
SE_43593	chr1:156115294-156133355	MM1S
SE_65290	chr1:156129865-156132879	Pancreatic_islets
SE_67276	chr1:156115294-156133355	MM1S

Enhancer Sequence

GTGCCCAAAC ACGGAGGGCC ACACAGGATG GCCATTTCCT GTGGAGAGAG GAAGCTAAGA 60
GGGGTGCTTA GTGAGGAGGG GGAGCTGGCC TTTGAGGCTC CCCAGGAAGG TGCAGAACTG 120
ATGCAGGGCC CCCGAGACTG ATATGGATGC CAGCCCCAGT CAGAGGCAGG TCTGTGGAGG 180
GCAGAGGAAC CCTCCACCCC ATCAGTTCTC TCTTCTCCTC TCCTCCACCC 230