EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-54444

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr9:136675320-136677230

Target genes

Number: 18
Name	Ensembl ID

RALGDS	ENSG00000160271
SURF6	ENSG00000148296
Y	ENSG00000201451
MED22	ENSG00000148297
RPL7A	ENSG00000148303
SURF2	ENSG00000148291
SURF1	ENSG00000148290
SURF4	ENSG00000148248
C9orf96	ENSG00000198870
ADAMTS13	ENSG00000160323
REXO4	ENSG00000148300
CACFD1	ENSG00000160325
SLC2A6	ENSG00000160326
DBH	ENSG00000225756
SARDH	ENSG00000123453
AL590710.1	ENSG00000256225
VAV2	ENSG00000160293
LINC00094	ENSG00000235106

SNPs

Number: 1
ID	Chromosome	Position	Genome Version

rs7021663

chr9

136676014

hg19

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EN2	MA0642.1	chr9:136676783-136676793	GCTAATTGGG	-	6.02
EWSR1-FLI1	MA0149.1	chr9:136677204-136677222	GGAAGGGAGGGAGGAGCG	+	6.15
REST	MA0138.2	chr9:136675865-136675886	TTCAGAACCAGGGACAGCAGC	+	8.64

Enhancer Sequence

ATCTAATCTG CAAGCGTGGA GAAAGAACCA GAAACAGCGC CGGTTAGCAG GGCCCACACT 60
GTCCTGGCAA GCTGGGCCTG GGACATCAGG AACGCCACCC CACAACCAGC CAACAGACCC 120
AAAGCCACAT CACGGCCCCT CGTGCTGCCC AGCTGGGCAG GGCGATGGCT CATGGGCCAG 180
AGCTCCCATA GCAGCCCCCT ACCCAGGCTC AGGAAATGGC ATCTGCCATC CTCTGGCTTC 240
TTCTTCCTTT GGGGAAGTCA CCATCTCTAT TACCTTCCAC TGGGGCTGTT CAGAGAGCTC 300
CAGACATGAC AGGGAAGGAC ATGGAGCAGC TGTTTTATCT CAGAGGACCC TGGCAGGAAG 360
CAGGAACTGC CCCTTGCCCC CAGCCCCTGC CTGGATGGAC TGGACAGCTC GAGACCAGCG 420
GGACCAGCGC TGGGCATGAG GACACTGTGC AGAGCGGGAC ATAGGCAGCG CTGTTCCCCA 480
GCCTGGCAGG TTCTGTGGAC ACTCCATGTC CTTTCACATG CGTTTTCTCA AAGAGGTCTG 540
AGACCTTCAG AACCAGGGAC AGCAGCGGGC TCCAGGGAGC ACCCACTCTC ACCAGGCATG 600
GATGGGGGTC TCGAGAAAGA GAGCCTGCAG GATCCAGGGC CAGGATCCCC CACACAACCT 660
CACAGGCAAC GCAGCCACCT GCTGAAGTTT ACCTGCAGGA CGCCCAGCTT TCAAACAACT 720
TGGGGAGTGA ACTGGCCTTG ACCAGTCAGA GCTCATTCCC AAGTCCAGAC GGCTCGCCGG 780
CCGCCTCGGG ACCTCTCAGG CCAGCTCCGG GGAGGCGAGG GGAGCCCCCA GCAGCAGGGC 840
CATGGCTCAG TCTTCCAGCC CTAACAGCTA CCCAGCCAGG CTCCCCGGGA AGGCAAACTG 900
GAGGCCCTGC TGCCTCCACA AAGGGCCACC ATCCCTCGGG GGAGACCCCC CGGTTATGGC 960
GGGGAACAAA ACTCAGTCGA GACCCTTCGA GGACAAGCAG AGAAACCTGC TCTTAACAGT 1020
CAGTTTGGGG GCTGTGAGAC CCCCAGCCCT GCACCTGCCT GTCTCTCCCA GCAGGATGCC 1080
AGCAGAGTGG GCAAGGCCTC TTTAGGGATT TGTTTCCCCA GCTTTCTGCT TCTCCACCAC 1140
CAGCTGGTTA CTCCCACACT AAAGGAAAAC ACTGAAATCA GCTTTCTGAG AAATTTCCTA 1200
TTTCTTTGGG GGAAGCCAAT GGCATCAAAA GCCTCCACGG TTGGCAAGTG GCATCTCACC 1260
CACTCTTGGG AGCCTGGGGG TCTGAGGGCC TGTGACCTGC CCTACCAGGT CCCTGTCTCC 1320
TCATTCCAGC TCCGCTGGAT CCCCACCTTC CACATAGCAG CTGCTGGCAA TAAACCCACG 1380
CGGAGCAAAC TGGCGTCCGA GAGATTATTC GCCAGTGCCT GCTTGGAAAT AAACATCCTC 1440
CAAACATAAA AGACGCACAG CTGGCTAATT GGGCCAATAT TGGTCTCATC ATTCTCCACA 1500
CAAAGGGGGA AAATGACGCG TGCTGTTAGA CCATGCGCCA AGTTACTATC TTAAGGCTCC 1560
CTGGGCAGGA ACAACTGAGG GGCCTGCAAG CCCTTGGAAG GAGAATCCCA TGGCAACACG 1620
GGCGGGGGTC ATGACCGTGG TGGTGTCATC TCTGGGCACC TGAGAACATC TCCATAGAGA 1680
GGAAGGGCAC AGAGTGGACC AGGAGTCAGC CAGGGTTTCC AAGGATGCTC CTCAGAGGAG 1740
CTCCGTGGGG ACTGGGAAGG ACCAAGGGGT GCACCTCTGG ACGTCCCCCT GCACCCAGAG 1800
CAGCTCCCCT TCGGTGGCTC AGACATGGGG ACAGCTCGGT ATTGTGTTAA GCAAGGGCCA 1860
GGCTGCTCTG CGAGGGAAGG GAGGGGAAGG GAGGGAGGAG CGGGGCAGGG 1910