| Tag | Content |
|---|
EnhancerAtlas ID | HS088-28287 |
Organism | Homo sapiens |
Tissue/cell | HeLa-S3 |
Coordinate | chr19:49361180-49362110 |
Target genes | | Number: 57 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr19:49361189-49361210 | AAAAAAAAAAAGAAACTGGCA | - | 6.16 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_11592 | chr19:49361573-49363222 | CD20 | | SE_13446 | chr19:49361928-49364201 | CD34_Primary_RO01536 | | SE_18664 | chr19:49361795-49363520 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19244 | chr19:49361851-49363223 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_37651 | chr19:49360150-49361940 | HSMMtube | | SE_59232 | chr19:49361792-49396070 | Ly3 | | SE_65554 | chr19:49361651-49363323 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr19 | 49361206 | 49361349 | | chr19 | 49361354 | 49361709 |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH19I048856 | chr19 | 49360151 | 49361940 | | GH19I048858 | chr19 | 49361961 | 49364097 |
|
Enhancer Sequence | ATAATAATTA AAAAAAAAAA GAAACTGGCA TGTCTTAGTG ACAAATAGTA GAGTGGGCAT 60
GTCCATAATT GAAGTGCTTT AGGAGATATT TTGAGGTTCA GAACTGGGCC CTCTCAACTT 120
CCTCAACTAC CTGCTCTCCA GCTGTGTGCC ACTGTGGGGA CACAGAGGGT GATAATAAAT 180
GCACCAGCCT GGCAAAACAG CCCCACAAGA TGATGGAATT TGCTACTCTC ATTCTCAGAC 240
TTGCAGTCAG CTGTGGATAT TCTGAGCTAC CGTCCCATGA TGCTCAGACA AAACAGCAGG 300
CAACCAACTT GCAAGGTGAA CTGGGGACAC AAGGGAGATG CAAACCTCTC ACCGCACTGT 360
CTTGGCACAG AGTATCCAGG ACTACAATCC CCATGATGCT TAAAGAGCAA TGGCTGGGCC 420
AGGCGCGGTG GCTCACGCCT GTAATCCCAG CACTTTGGGA GGCTGAGATG GGCAGATCAC 480
CTGTCAGCTG GTCAGGAGTT CGAGACCAGC TTGGTCAACA TGGTGAAACC TCATCTCTAC 540
CAAAAATATA AAAATCAGCC GGACGTGGTG GCAGGTGCCT GTAATCCTAG CTACTCGGGA 600
GGCTGAGGCA GGAGAATCGC TTGAACCCGG GAGACAGAGG TTGTAGTGAG CCGAGATCGT 660
GCCACTGCCC TCTAACCTTG GCGACAGAGC AAGACCTCAG TCTCAAAAAA AAAAAAAAAA 720
AGCAATGGCC GAAGACCAGC CTAGAAAGAC AGCCCAGACA CCTGAGAGGA GCTGGACACC 780
TGATAGGTTC AAGCTCTCTC TCACCTGAGC CCAGCTGAGA TCATTATGGA CTACAATACC 840
CATGACACCC AGGGAGCAAT GGCCTTGAGA ATACGGAAAG ACAGCCCTGA GGCCTGATGG 900
GAAACGTAGT CCCCTCCTTC TCACCTCTCT 930
|
