| Tag | Content |
|---|
EnhancerAtlas ID | HS088-28256 |
Organism | Homo sapiens |
Tissue/cell | HeLa-S3 |
Coordinate | chr19:49111890-49112680 |
Target genes | | Number: 49 | Name | Ensembl ID |
|
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr19:49112512-49112533 | TCTTTCTTTCTTTTTTTTTTT | + | 6.25 | | SOX10 | MA0442.2 | chr19:49112252-49112263 | AAAACAAAGAC | + | 6.14 | | ZNF143 | MA0088.2 | chr19:49112226-49112242 | CTCCCACAATGCACCC | + | 6.47 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr19 | 49112246 | 49112556 | | chr19 | 49112029 | 49112498 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I048608 | chr19 | 49111888 | 49112613 |
|
Enhancer Sequence | CAGGGTTTCC CCATGTTAAT CAGGCTGGTC TGAAACTCCT GACCTCGGGT GATCCACCTG 60
CCTCGGCCTC CCAAAGTGCT GGGATTACAG GTGTGAGCCA CCACGCCCAG CCCAAAAGCT 120
GTGTTTTAAC AAGCGCTCCC AGGGATTCTG GTGCATGCAC AGGGTTGAAA GCCACTGTTC 180
CTGAGCAGTG TTCTCAGCTG GGCACCTGTG CTCCCCAGTG GGCATCTGCG CTGTCTGGAG 240
AGGTTTTCGG TTCTCTAATT GGCAGGGAAA GTCGGGGGTA TGGGGCGTGT GATGCTACTG 300
ACCTCTGCTG GGTGGAGGCT GAAGATGCCG AGGAGCCTCC CACAATGCAC CCAACAGCTC 360
CTAAAACAAA GACTTACCCA GCCCGAGCGT GGGTGCCACC CCTGTTGAGG GACCTGGTTC 420
TAGAGGCTCT AACCCTATCA GCCCATGACA TAGAGGGGGA AACTGAGGCA CAGAGAGGTG 480
AAGTAAGTTG CCTGAAGTCA CACAACGAGG AACTGAGAGA GCTAGAATTT GAATCCAGGC 540
CGTCTGGTCC CAGAGGCCAC ACCCCTCTCC TCCCTAGCTG TGCTGTGACC CTGTGAGGTA 600
GGTGCTGTTA TTATTTGCAG TTTCTTTCTT TCTTTTTTTT TTTTTTTTTT TTTTGCTTTT 660
TTGAGATGGA GTCTTGCTCT GTCTCCCAGG CTGGAGTGCG ACAGCGCGAT CTCGGCTCAC 720
TGCAACCTCT CTCCTGGGTT CAAGCAATTC TCCTGCCTCA ACCTCCCAAG TAGCTGGGAA 780
GACAGGGTTT 790
|
