EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-28201

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr19:48634430-48636230

Target genes

Number: 29
Name	Ensembl ID

EHD2	ENSG00000024422
GLTSCR2	ENSG00000105373
SNORD23	ENSG00000221803
PLA2G4C	ENSG00000105499
LIG1	ENSG00000105486
C19orf68	ENSG00000185453
CARD8	ENSG00000105483
EMP3	ENSG00000142227
GRWD1	ENSG00000105447
KCNJ14	ENSG00000182324
CYTH2	ENSG00000105443
LMTK3	ENSG00000142235
SULT2B1	ENSG00000088002
RPL18	ENSG00000063177
DBP	ENSG00000105516
CA11	ENSG00000063180
RASIP1	ENSG00000105538
IZUMO1	ENSG00000182264
BCAT2	ENSG00000105552
PLEKHA4	ENSG00000105559
TULP2	ENSG00000104804
NUCB1	ENSG00000235191
CTD	ENSG00000260366
BAX	ENSG00000087088
FTL	ENSG00000087086
GYS1	ENSG00000104812
RUVBL2	ENSG00000183207
SNRNP70	ENSG00000104852
LIN7B	ENSG00000104863

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HSF1	MA0486.2	chr19:48634514-48634527	GAAGGTTCTGGAA	-	6.3
Nr2f6(var.2)	MA0728.1	chr19:48634914-48634929	TGAACTTTCGACCTC	-	6.03
Nr2f6(var.2)	MA0728.1	chr19:48635830-48635845	GAGGTCAAGAGATCG	+	6
RARA	MA0729.1	chr19:48634911-48634929	TCTTGAACTTTCGACCTC	-	6.49

Enhancer Sequence

GTCACGATGG GAGAAGGGAG GGGAAATCAG CTGAGTCCCC TCATGTGGCC TCAGCTTTCT 60
CTTCTGACCC CACCTGCACT GGTAGAAGGT TCTGGAAGCT CTGGAGGAGG AACTGGTGCA 120
GAGACTTGAG CGAATCATCT CCTCAGTTCC AACAGCACCT CCCAGCCCTG CTCTGGAAGG 180
CCCTACCATC ATTTTCTTCT TCATTTCCAA TCCCTACACC TCTCCCCATG TAGGCACATG 240
CACCTTGCTG CATGTGGGTG CTGATTTGTT TAAATGTCAT TATGCTCTAG ATCTCATTCT 300
GATTTTTTTT TGAGGCGGAG TCTCGCCCAG GCTGGAGAGC AGTGGTGCAA TCTCTGCTCA 360
ATGCAACCTC CACCTCCCGG GTTCAAGAGA GCCTTCCGCC TCAGCCTCCC AAGGAGCTGG 420
GATTACAGGC GCCCACCACC ACACCTGGCT AATTTTTGTA TTTTTAGTAG AGCCAGGCTG 480
GTCTTGAACT TTCGACCTCA GGTGATCCGC CCACCTTAGC CTCCCAAAGT GCTGGGATTA 540
CAGGCGTGAG CCACTGCGCC CAGCCTCTAT GTCTATTTAT TTTAAGACAG TCCGGTCACA 600
GCCCTTGAGC AGGGCGGCAT ATATAGCATC TTATATGTTT GTTATTATTT CCAGGAACAG 660
TTGTCAAGAA ATCATTGTCA CTATCGTAAA TCATCTTGTG TCTTTTTTCT CAACACTATT 720
TTGGAGATCC ATCTCTGATC CTGTGTCTGT TGGATCCACC CTTTTTTTTT TTTTTTTTTT 780
AAAAGATGGA GTCTCACTCT TATCGTGGAG GCTGTAGTGT AGTGGCACGA TCTTGGCTCA 840
CTGCACCCTC TGCCTCCTGG GTTCAAGCAA TTCTCCTGCC TCAGCCTCCC GAGTAGCTGG 900
GACTACAGGC ACACGCCACC ACACTGGCTC ATTTTTGTGG TTTTAGTAGA GATGGGGTTT 960
CACCATGTTG GCCAGGCTGG TCTCCTCAGG GGTCCACTTC CTGTAACTGC CCCGAGCCCT 1020
GTGGCTCCCA CCCACTTTGC CTGCTTACCT ATCCCCAGGT GAGAAGGCCC CACACTTGCC 1080
AGGACAGAAG AGACACAACA CATTCTTACA GACCCCAGGA CCAAGGACGC CTGAGGCCCT 1140
GGATCACAGG ACACACATGC ACGTCACGGC ATGAAGGGGT CATGTAGGCA CCTCCCAGAA 1200
CGGCTGTTAA AATGAACACA CCCACCAGCA GCATCAGCGG AGCCCACGTT TCATGAGCTC 1260
CCACTATCAT CGGTCAGGAC TCTGGAGGAT TGTAGCTTCG GATAAGCTGG TGAGGTAGTT 1320
AAGACCACAC CCTAGAGGCC AGGCACGATG GTTCATGCCT GTAATCCCAG CACTTTGGGA 1380
GGCTGAGGTG GGTGGATCAT GAGGTCAAGA GATCGAGACC ATCTTGGCCA ACATGGTGAA 1440
ACCTCGTCTC TACTAAAAAT ACAAAAAATT AGCCGGGCAC GGTAGCGGGC GCCTGTAGTC 1500
CCAGCTACTT GGGAGGCTGA GGCAGGAGAA TCACTTGAAG CCAGGAGGTG GAGGTTACAG 1560
TGAGCCAAGA TCATGCCAAT GCACTCCAGC CTGGATGACA GAGTGAGACT CTGTCTCAAA 1620
AAAAAAAAAA AAAAAAAAAA AAAAGAACAC ACTCACTGCA TGGAGGTGGA TGCTGAAGCC 1680
CAGAGAGATG AGCGAGGGCT CGGCAGTCTG TGGCGCAGGC CGGCTTGAAG CTCAGGCCTC 1740
AGTGACCCCA CACCCCTGCT CTTTGACGTT TTCCTGTCTG TGGAAGGGAC ATGTCCCACT 1800