Tag | Content |
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EnhancerAtlas ID | HS088-26505 |
Organism | Homo sapiens |
Tissue/cell | HeLa-S3 |
Coordinate | chr19:6515880-6518910 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr19:6517054-6517073 | GGTCCACCAGGGGGCGCCC | + | 7.12 | EBF1 | MA0154.3 | chr19:6517287-6517301 | AGTCCCTGGGGACT | + | 6.28 | EBF1 | MA0154.3 | chr19:6517287-6517301 | AGTCCCTGGGGACT | - | 6.93 | KLF14 | MA0740.1 | chr19:6516124-6516138 | AAGTGGGCGGGGCC | - | 6 | KLF14 | MA0740.1 | chr19:6516196-6516210 | AAGTGGGCGGGGCC | - | 6 | SOX10 | MA0442.2 | chr19:6518436-6518447 | AAAACAAAGCA | + | 6.02 | SP1 | MA0079.4 | chr19:6516044-6516059 | AATGGGCGGGGCCTG | - | 6.28 | SP1 | MA0079.4 | chr19:6516125-6516140 | AGTGGGCGGGGCCTG | - | 6.76 | SP1 | MA0079.4 | chr19:6516197-6516212 | AGTGGGCGGGGCCTG | - | 6.76 | SP2 | MA0516.2 | chr19:6516043-6516060 | AAATGGGCGGGGCCTGG | - | 6.05 | SP2 | MA0516.2 | chr19:6516227-6516244 | AAGTGGGAGGGACTAAG | - | 6.87 | SP2 | MA0516.2 | chr19:6516124-6516141 | AAGTGGGCGGGGCCTGG | - | 6.9 | SP2 | MA0516.2 | chr19:6516196-6516213 | AAGTGGGCGGGGCCTGG | - | 6.9 | SP4 | MA0685.1 | chr19:6516042-6516059 | GAAATGGGCGGGGCCTG | - | 6.8 | SP4 | MA0685.1 | chr19:6516123-6516140 | GAAGTGGGCGGGGCCTG | - | 7.51 | SP4 | MA0685.1 | chr19:6516195-6516212 | GAAGTGGGCGGGGCCTG | - | 7.51 | TCF7L2 | MA0523.1 | chr19:6518315-6518329 | TGCCTTTGATGTCA | - | 6.22 |
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| Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
SE_04576 | chr19:6515779-6517785 | Brain_Anterior_Caudate | SE_04576 | chr19:6517811-6518594 | Brain_Anterior_Caudate | SE_05428 | chr19:6514842-6518872 | Brain_Cingulate_Gyrus | SE_06410 | chr19:6513667-6518095 | Brain_Hippocampus_Middle | SE_07190 | chr19:6513827-6517835 | Brain_Hippocampus_Middle_150 | SE_08344 | chr19:6514848-6518047 | Brain_Inferior_Temporal_Lobe | SE_59187 | chr19:6504315-6557596 | Ly3 | SE_60909 | chr19:6515936-6539276 | DHL6 | SE_61349 | chr19:6504438-6557049 | HBL1 | SE_62127 | chr19:6504461-6555983 | Toledo |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 4 | Chromosome | Start | End |
chr19 | 6516049 | 6516950 | chr19 | 6517219 | 6517572 | chr19 | 6518135 | 6518457 | chr19 | 6518032 | 6518368 |
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| Number: 2 | ID | Chromosome | Start | End |
GH19I006515 | chr19 | 6515621 | 6517670 | GH19I006517 | chr19 | 6517741 | 6518832 |
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Enhancer Sequence | CGGGAGTCGG AGGTTGCAGT GAGCCGAGAT CGCACCATTG CACTGCAGCC TGGACGACAA 60 GAGCAAAACT CCGTCTCCAA AAAAAAAAAA AAAAAAAAAA GCAGAAAACA GAGTGGGGCA 120 CGAAGAGTCT CCAGGCCCTA TTCCCAGGTC ACTAATGATT GGGAAATGGG CGGGGCCTGG 180 GAGAATGACA GGGAGGTGTG AGGGACTGAG GAGTGGGCAG GGTCTGGGAG GCTGATAACA 240 GGGGAAGTGG GCGGGGCCTG GAGATAATAT TGGGAGGAAC TGTGGCGTGG GAAGGGCCTG 300 GAGCGGACAG CAGGGGAAGT GGGCGGGGCC TGGGGAGAAT GACAGGGAAG TGGGAGGGAC 360 TAAGGAGTTA GCAAGGGCTG GGAGACAAAT AACTATGAAG TGGGCGGAGT CTAGGGAGAA 420 TGACCGTGGG GTAGGGGAAC TGAGGAGTGG GCTGGGCCTG GGAGTCTGCT GGGGAAGCGG 480 ACGGTCCTCG AGAGAATGAC AGGAAAGTGG GAAGGACTGA GGAGTGGGCA GAGCCTGAGA 540 GGCAAACGGA TGGGTACGAG GGCGGGGCCT GGGGAGAAGC TAGGGAGGTG GGAGGCGGAT 600 GACAGCGGAA TGGGGCTTCG GTAGACTGAC AGGATCAGTC GTGGAAGGGG CGGGCCCATC 660 TTTCTCTTGA ACCCGCGAGC CAAAGCCACG TTGGTGCTGG TGATCATCCA GGCTGAGCGC 720 TGGGCATTCC CAGTCTCGGG CGATTTCTTG GCGTTACTTC CAGGCTGAGA GCCATGACTA 780 GGCGAGCTTC GGCCGTGGGA CCGAAGACCT CCCACCCTCA GCACTCTAAC CTCCCCGACC 840 CTGCCCTCGC TGTGCCTCGT TGGGAATCCG CCTCCGGGGT CTTCCGCGGT CCAGGAGCCG 900 CACCTGCCGG GTGGAGACGC GGGGCTGGCT GGGGTGCGGG AGTAGGAGGT CTTCGGTCCA 960 ACCGCCTCCA ACCCATTCCT GCTTCCGACG TTCTGTTCCC GCGCTTAATG CCCTGCCCGA 1020 TCCAGTTCCG GCCTCCCATC TCCCCTTCCC GCGTCTCCAC GCTCTTTCCT TCCCCGGTTC 1080 TGCCGTGAAT GCTCCCAAGT CCTAGAGCAC CGGAACTCCC CGCGCGCCTT GGCTCCTGGG 1140 CCCCAGCTCC GTGCAGTCCT GGACTGGGGC TCCAGGTCCA CCAGGGGGCG CCCGCTGCCC 1200 AAGCTGGGTA TCGCTGCGGA GAAAAGGGGC CCAGAGTGAT TGTTCCTCAG GGGAGGGAGG 1260 GGGAGGTCCC CAGAGGGAAG GGCCTGAGTT TCCTCTTGGG GGATGGATCC TAGGTGGTCT 1320 GAGGGGTGAG TCCTGGGTTC CCTGGCGGGA GTGGATCTTG GGTGGTCCTC TGTGGGTACA 1380 GGGTGGAACT TGGGTGTTCT GAGGGGTAGT CCCTGGGGAC TCCTCTGGGA GCGGGGCAGA 1440 CCTTGGATGG TCGTAGGATT GGACCTGGAC CTCTGTGTGT GTGATTGTGC ATGCCCATAA 1500 CGTGTGTTCT TGCGTTATGT CTATGACTAG CCATGGTGCC TGCCATGTAT GTGTATCTAC 1560 GATTGTGTCT TTGGGTGTCT GTCTCAGTGT GTAACCGTGT ACGTGTGTGT TGTGTACCTC 1620 CATGTCTGTT TTGGTATGTG TGTGATGGTG TGTCTGTGTT GGTGTGTTCT AGTCTCGGTG 1680 TGTTTGGTTA TATGCCCTGA ATATATGTCT CTTGTGTCCT TGTGTGTGTC TGTTGCTAGC 1740 TTTTTTTTTT TTTTTGAGGC AGAATCTTAC TCTGTCATCC AGGCTGGAGT ACAGCGGCGC 1800 CATCTTGGCT CACTGCAACC TCTGCCTCCC GGGTTCAAGC GAGTCTCCCA TCTCAGCCTC 1860 CTTAGTAGCT GGGACTACAG GCACTCACCA CCACGCCCGG CTATTTTTTT TTTTTTTTTT 1920 TTTTTGTATT TTTGGTAGAG ACAGGGTTTC ACCATGTTGG CCAGGTTGGT CTCGGACTCC 1980 TGACCTCAAG TGATCTGACT GCCTTGGCAT CCCAAGGTGC TGGGATTACA GGCGTGAGAC 2040 ACTGCACCCG GTCTGTGGCT AGCTTTGATG GTTGTTGTGT ATCTATGATT GTGTGTCCAG 2100 GTGTGTGTGT GTGTGTGTGA TTGTGTGTAT GTCTGCATGG TGTGTCTGTA TGTCTGTCTT 2160 GTTTTGTGTG ATTGTATATG TCCAGAATGG GTGTGCCCTT TGTGTTCTGG TGTCTGTGTG 2220 TGTCTACTTG TGTCCCTCCC CCAGGGGAGT TGGAAAGTCC TTTCCAGGTA GTTACCCTGC 2280 TGGGATTCCC TTTCCAAAGC GGGTTGACTT CCCAGCACCG TGAGCTGCCT CTTCATGCTC 2340 TTGGAAGGGG TCGCTGGGTC TGCCCCAAGT CTGCCTGGGT CTTCCCCAAC CCTGACTCCT 2400 CCTTCCACTG CCCTCAACAG GGAAACACCA TTTCCTGCCT TTGATGTCAC TAGGTACAAA 2460 AAGTTTCCTT CCTCCAAGTG GCTCTGGCCA CTGGTTTCTT TCTGCGTGTG TGAAAGCTGG 2520 CCACGATTCT GTGCTTAATG TTAAAACAAA AAGAATAAAA CAAAGCAAAC AAAACGAACC 2580 CATGGAAAAT GCAAGCATGC AAAATCATAC ACCATGAAAC ATCCACATCT TCTCACCCCA 2640 ATACCCTCAA TTTTTGCACA TCTTTCTGAA ATGTTTTATA CAAACCTATT TCTGCTCTGA 2700 AACCCAAAGC GTGCATTCTG CACATAGCAG CCTGCACCTT GCTTTCGTTT CTTTTTTTCC 2760 TCACTTGGTT ATTCTTTTAA AGGTTTTTTT TTGTTCCCCC GAGACAGAAT CTCACTCTGT 2820 TGCCTAGGCT GGAGTGCAGT GGCATGATGA TCTCGGCTCA CTGCAGCCTC TGCCTCCTGG 2880 GTTCAAGTGA TTCTCCTGCC TCAGCCTCCT GAGTAGCTGG GATTACAGGC ATGCGCCACC 2940 ACACCTGACT AATTTTTGTA TTTTTAGTCG AGATGGGGTT TCCCCATGTT GGCCAGGCTG 3000 GTTTCGAACT CCTGACCTCG TGATCCACCT 3030
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