EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-26316

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr19:3022500-3023710

Target genes

Number: 17
Name	Ensembl ID

SGTA	ENSG00000104969
THOP1	ENSG00000172009
ZNF555	ENSG00000186300
AC006277.2	ENSG00000253392
ZNF77	ENSG00000175691
TLE6	ENSG00000104953
TLE2	ENSG00000065717
AES	ENSG00000104964
GNA11	ENSG00000088256
GNA15	ENSG00000060558
S1PR4	ENSG00000125910
NCLN	ENSG00000125912
NFIC	ENSG00000141905
C19orf71	ENSG00000183397
MFSD12	ENSG00000161091
HMG20B	ENSG00000064961
C19orf29	ENSG00000105298

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF13	MA0657.1	chr19:3022914-3022932	CATGAGTGGGCGTGGCTA	-	6.12
KLF14	MA0740.1	chr19:3022917-3022931	GAGTGGGCGTGGCT	-	6.51
SP1	MA0079.4	chr19:3022918-3022933	AGTGGGCGTGGCTAT	-	7.19
SP3	MA0746.2	chr19:3022918-3022931	AGTGGGCGTGGCT	-	6.54
SP4	MA0685.1	chr19:3022916-3022933	TGAGTGGGCGTGGCTAT	-	7.41
SP8	MA0747.1	chr19:3022918-3022930	AGTGGGCGTGGC	-	7.22

Enhancer Sequence

CGGGCGACAG AGCAAGACTC TGTCTCAAAA AAAAAAAAAA TTTTTTTAAG GAAAAAAATA 60
ATAGATTTAA ATATTATTAA TAGTTAACCT AAGTGTAAAT GATCACACGG GGCTGGTGAC 120
TGCCGTGTAG GATAGCGGAA CAGTAGTATA TTCCACTGTA TGCACTCTGA GGCTGCTTGT 180
GTATACACGC TCCTGAAGAC AGACATCTGG GCTGTCTCCA CCAAGGAGGT ATCAGGATGC 240
GGATACAGAG CTCCCATGGG GGTGCACCTG TGTGTGGGTG TGTGTAGGAT GGGTTGGAAG 300
ACTTTCTAGA AAGGGCCAGA GAGTGAAAAC ATTTTCCCTC TGCAGGCCAG AGGTCTCTGT 360
TGCAACTACC AAACTCTGTC ACTGTAATGG GAAAGCTGCT GGAAATGATA TGTACATGAG 420
TGGGCGTGGC TATGTCAATA AAACTTTATT TGCAAAAACA AGTGGAGGGG TGGAGCTGGC 480
CCTCGAGCTG CAGTTTGCTA ATTCCTGGAA ATGTGTGCCT TACTCATTCC TTTCAACAGT 540
CATTTTACCT AATCTTTTTT TTTTTTTTTT GAGACAGAAT CTCGCTGTGT TGCCCAGGCT 600
GGAGTGCAAT GGTGCGAACT CGGCTCACTG CAACCTCCAC CCCCCGGGTT CAAGCAATTC 660
TCCTGCCTCA GCCTCCCGAG TAGCTGGGAC TAGCCCAGCT AATTTTTGTA TTTTTAGTAG 720
AAATGAGGTT TCACCATACT GGCCAGGTGG GTCTCAAACT CCTGACCTCA TGACCCGCAC 780
GCCTTGGCCT CCCAAAGTGC TGGGATTACA GGCGTGAGCC ACTGGGCTCG GCCTACCTAA 840
ACTTCTTGCG GCTCTTGCCT TTCTCTAGAC CACCTCGTCC CCACTTTCCG CTGCAGATGC 900
TCTTTATGTT CTGTGTCTAC ACAGGACCTC TCCCCACCCC AAGCTTCCAG AAATCTCAGA 960
CTCAGTGGAA TCTGAACAAA CTGAGCATCT CCCCTCTGGG TTTGGTCCTC AAGGCATCAA 1020
GGATCCTCCC AGTGTATCCA CTCTGAAGTA GAACTATCTT TCACGTCTCT CTGAAGAGAG 1080
AACGTACCAC ACAGAAACAG GGACAGTGCA GGCTGGGTAC AGTGGCTCAC ACCTGTAAAC 1140
CCAACACTCG GAGCCTGACA CGGGCGGATT GCTTGAGTCC GGGGGTTCGA GACCAGCCCG 1200
GGCAACATAG 1210