EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-13341

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr12:57576590-57577160

Target genes

Number: 18
Name	Ensembl ID

RDH16	ENSG00000139547
ZBTB39	ENSG00000166860
TAC3	ENSG00000166863
MYO1A	ENSG00000166866
TMEM194A	ENSG00000166881
NAB2	ENSG00000166886
LRP1	ENSG00000123384
STAT6	ENSG00000166888
RP11	ENSG00000259125
NXPH4	ENSG00000182379
SHMT2	ENSG00000182199
NDUFA4L2	ENSG00000185633
STAC3	ENSG00000185482
MIR616	ENSG00000208028
DDIT3	ENSG00000175197
MBD6	ENSG00000166987
DCTN2	ENSG00000175203
PIP4K2C	ENSG00000166908

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF4	MA0039.3	chr12:57576711-57576722	AGAGGGTGTGG	-	6.02
ZNF740	MA0753.2	chr12:57577051-57577064	GTGGGGGGGGATG	-	6.01

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH12I057182

chr12

57576668

57578586

Enhancer Sequence

TTCCGTCTCA AAAAAAACAA ACAAAGAAAA ACAAAAGAAA AGAAAAGAAA AAGAAATGGG 60
ATAACTGGGA ATGAGACTGG CTTCGGAGTG ACCTTAGGGG GTTGAGTTTT TGATGTTGGA 120
GAGAGGGTGT GGCATAGACC AGACAGAGGG AGGACAAAGA GGAAACTAGG ATCAGGCTGA 180
GCACCAAACT GGAAGTCTAG ATTTTGGAGT CACCTAGTCC TGATTGTCTG GTCTGAACTC 240
CCAGACTTTC CCTAAGGAAC TTGCAGGGGT GCAGGGTTGG GTTGTGCTGG GTGGAGGCCG 300
GCAGAGCACA GGGTGAGAAA TCCGAGTCTC TGCTGCCCTC TCATGGTGGC TAGGGGTCCT 360
GCAGGTGGTT CCCCAGAGCT ACCAGCCAGG TGCGCTTCCT CCCGGCCCAT GCTCTGGCCT 420
CAGGCTAGGG TGTGTGTGCT GGGTGGAGGA TAGGGATGAT GGTGGGGGGG GATGATATCA 480
AAGGAGAAGC AGAGAACAGT TGGAGGGTGA CAGGAACCAA GTTTAAGGGA GTGTTGGCGA 540
TACCCATGCC TTAAGTTTCC TTGTCTTTCA 570