EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-09663

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr11:47188440-47189450

Target genes

Number: 32
Name	Ensembl ID

SNORD67	ENSG00000252427
CKAP5	ENSG00000175216
LRP4	ENSG00000134569
C11orf49	ENSG00000149179
RP11	ENSG00000255520
ARFGAP2	ENSG00000149182
PACSIN3	ENSG00000165912
DDB2	ENSG00000134574
NR1H3	ENSG00000025434
ACP2	ENSG00000134575
MADD	ENSG00000110514
MYBPC3	ENSG00000134571
SPI1	ENSG00000066336
SLC39A13	ENSG00000165915
PSMC3	ENSG00000165916
RAPSN	ENSG00000165917
AC090559.1	ENSG00000244152
NDUFS3	ENSG00000213619
PTPMT1	ENSG00000110536
CELF1	ENSG00000149187
RNU5E	ENSG00000200376
AC104942.1	ENSG00000231880
KBTBD4	ENSG00000123444
FAM180B	ENSG00000196666
C1QTNF4	ENSG00000172247
MTCH2	ENSG00000109919
AGBL2	ENSG00000165923
Y	ENSG00000200090
snoU13	ENSG00000252447
FNBP4	ENSG00000109920
RN5S340	ENSG00000252941
PTPRJ	ENSG00000149177

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr11:47189417-47189438	AAAAAAAAAAAGAAAGAAAAA	-	6.59
Spz1	MA0111.1	chr11:47188736-47188747	GCTGCTACCCT	-	6.02

Enhancer Sequence

AGGGGAAGAT GTGGAATATC TCGGACTCCT CCCATTATCA TCAGGGGAGG CAGAGTACAG 60
AGGCCAAACA GAGCACCAGT GGCCTTTTGG TGATGGGTTA CCAGGTCCCA TTCTGTCTGT 120
GGCTCTGTGG CTCTGGGCCC CTCTCCCCTG GTGAGGAGTC ACCCTTCTCC ACATTGAGGC 180
CAAGGCCCAG AGAGCTTAGG AACCTGCACT AGGCAGGGTG GAAATACAGC CTGCAGTGGC 240
CTAGGCTCCT GCCCAAAAGC ACACAGCTTC GTCAGCATTC AGGAGGCCAC ACAACTGCTG 300
CTACCCTAAT CCTAGTGACA ACTTGCCTAG TACTACAATG AGCATATGTG TCGGTCTGCC 360
TGGCTTTATA CCTACTCTTG TCATAACTAT GAATAGCAAA CTGCCCCCTT TACTCTCAAA 420
AGCATCCTGG TGTGGAAAGG GAGATGGTTG CTCTCATCTC ACGCTGAGTA TGTGGACACT 480
GGGCCAGGTA TTTCCGGAGA CCCTATGAAG TAGTTACGTT CCCATTTTAT ACGGGGATAA 540
CTCACAGATA TTATGTCAAC TAAACAGATC CCAGATTAAG ATGGAGTAGG GTTTTAAAAA 600
ATAAGAAGGG GGCTGGAGAC ATAAAACCCC TGAAAGGAGG TCAGGACTGA AGCATACAAT 660
CAGGCTCCTC CGGCCAGAGA AATGGACCCC AAGCAAAAGA AGCTGCCAGG CCCTCTATGA 720
TGACAAAGCA CAACTCAAAC CGAAGCCTGA CTGCTGCCCT GTCTAATGAG GCAGGCACCA 780
GCCACTGGTG GCTATTTACG TTTATCAGAA ATTAAACTAC ATCAGAAATT GTTGCTCAGT 840
TGCACCAACC ACATTTTAAG GGCTCATAGC CACATAGTAG TGGCTACCAT ATTAAACAAC 900
ACAGAGAACA TTCCCATCAA CACAGAAAGT TCTTCTAGAC AGTGCTGCCT TAGAATTCTC 960
TACCTTCAGC TTGTTTAAAA AAAAAAAAGA AAGAAAAAAG AAAAAACAGC 1010