| Tag | Content |
|---|
EnhancerAtlas ID | HS088-05027 |
Organism | Homo sapiens |
Tissue/cell | HeLa-S3 |
Coordinate | chr1:204957940-204960410 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr1:204959702-204959723 | AAAAAGAAAAAGAAAGAAAAA | - | 7.26 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_03413 | chr1:204957071-204963292 | Brain_Angular_Gyrus | | SE_04773 | chr1:204955055-204976400 | Brain_Cingulate_Gyrus | | SE_05776 | chr1:204953597-204974667 | Brain_Hippocampus_Middle | | SE_06697 | chr1:204955492-204964198 | Brain_Hippocampus_Middle_150 | | SE_07725 | chr1:204953493-204964116 | Brain_Inferior_Temporal_Lobe | | SE_08970 | chr1:204957882-204958442 | Brain_Mid_Frontal_Lobe | | SE_08970 | chr1:204959155-204959422 | Brain_Mid_Frontal_Lobe |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 204958161 | 204958903 | | chr1 | 204959000 | 204959441 |
|
| | Number: 4 | ID | Chromosome | Start | End |
| GH01I204988 | chr1 | 204957883 | 204958442 | | GH01I204991 | chr1 | 204958521 | 204958690 | | GH01I204989 | chr1 | 204958865 | 204958970 | | GH01I204990 | chr1 | 204959156 | 204959422 |
|
Enhancer Sequence | GCATGGCAGC AGCCCCTGGG GTAAAAGGTC CCAGCTAATT CCGAGGCCTA GAGAAACACT 60
GAGATCTGTA GCTGGCTGCC TGGGATGGAG AGGAAATGAG ACTTGCAAGT CCTCAAGCCC 120
TCGGAAGGTG AGAACCCATC TTATGTGTGA GAGGTAGGTG CTGGCATTGT ATCTGGAGCT 180
CAGCTCTCCT TGGACCACTG TGGTCACACC TGGGTCCCCA CTTGCCCTGA CTTGCTCAGT 240
CACTTGACAT CTATCATCTT TCCTTCTTGT AGAGGAATAA GGAAGAGAGC ATGAGTTGAG 300
AAATGAGAGA AATCATAATG AACTCCAAAG AACAGTGAGT GTTCACCTCT TGAGGGAGGC 360
AGGAATATGA TTGTGAGTGC TCCCATGAGG GCTCTGGGGA CAACCTTCTT TCTTCGAAGG 420
CACATGGGTT CAAGGAGGTA GGGGAAACCG TCAGGATGAC GCTGTTACTG GCATCATGAG 480
TAGAGCAGAG AATGTGGTCC TTCCTTGCAG CCTGAATTGG ATGCGTTGTC AGGCTGCAGA 540
GAGGAGGAGG AGTTAGGAAA CAGCCATTTG CCAAGCCAGC TTCACAAAGA GCAAATGAGT 600
TCATCACCTG GGTCCAGGCG TCATCTGGCA GCATTTCAGC CCCACCAGAG CTGCACCTGC 660
CTGAGGACTC CACTAGAGGG GGCTCCAGGC TCACCCGCAC ACGCACTGGC ATCAGGGGAA 720
TGTGCAGTCT GGGACCTCTC GAGGAGGCAA GGCTGCAAAA GCCTCAATAC TGGCACACCC 780
TCTGGGAAAG GCTGGGGACC CCCGTGTGTC TCCAGAGATA CAATGGTCTA TTCAACAGCC 840
ATTTCTTGAG TACCCACAAT GTGAGGTGCC AGACACTGCC ACACACAAGG GATATACAAA 900
GGTAACAAGA AGCTCACACC ATCTAGAGGG GGAGTCATCT ATAAGAATAT CTAATTGCAT 960
GTCTAAATGA GGGGGCGCAG TGGCTGGGCA GAGAAGGGGA TTCAGTCTTC ACGGGAAGAC 1020
TCCAGAGAAG AGGTGATGTG AGTGGGCACT CTGGAAGCTG ACAAGTCATC GTGTCTGGTG 1080
CTTTCCACAG AAGGGTCAGG TCCCGTGGCC TGGCCCAGGC CCAGACGGGG TCTTCTGAAT 1140
ACCACCCCTA CCCGCATTCC AGGAGAGCAT CAGTGCTGCC TTCTCTGGGG CTACCAGGCC 1200
CGCTGCGTCA CCCCGGGATC CCAGGCAGCT TCACAAGCTG CCCACATCCT TCCCCAGCCC 1260
ACCACTCTAG CCAGTAGACC AGCGCTGAGG CAGGAGAAGA GGGGCCAGGC AGAAGCAGAG 1320
AAAGGCTGAC AGCCCGCTCT GCATCCCTCT CTGGTCTCAG AAACCAGGAG TGAGTCACAC 1380
AACCAGCTCT CCCTCCTGCT GTGCTCTTCT GCACTCTCCC AAGCCCCTGG GCACTCGGGA 1440
AGTTTATTAG GGCAGGGGGA CTTAGGTTAG TGGCTGATGT GTGTCTGTCA CCAAAGGCCA 1500
GGCCAGGCCA GGCCATGATG CACTTTCTTG ATTACTCAAT TCTGCAAATA GATAGATAAA 1560
GAGAGCCCCT TCTTCCCTCC CTATGTGCAC CCCAATACAG AACATCAGAT AACAAAGCCC 1620
TATTGTCCAG CCCCAGTAAC CACCACAGAG AATGTTCTGC AGCCCCAGGG GACAAAAGGA 1680
CAAATAGAGG CTTTTTTCTT AACTTAGGGC TTTGCAGAAA ATTCAAGAAT TTCACTTAGG 1740
GCTCTCAGTC CAAAAAAAAA AAAAAAAGAA AAAGAAAGAA AAAAGAAAGG GCTCTCAGTC 1800
CAAACTTGGG TTTCTAACTT CATAAAGTCC AACTGGAGGG GAAGAATTGG AGTGACGGAA 1860
TACCAGGAGA GGGGCTCCAG GCTCCATCCT TCAAAGTTCC CGCCTTCCAA GGTTGCGATG 1920
GTGTGGAGTG GGTGCAGCTG AACATGCTCC CTCTCTCCTA TCCATCCCAC TATTCAGCAT 1980
CTTCCCCCAA AGACAGGAAC CATCCTTTTG ACTGGAGTTG GTGTCCTCCC ACACCACCTA 2040
CTCCTTATCC CCTCAATTCC TGGCATCATG GAGCGTCACC CAGCCTGCTC AAAGGTCATG 2100
CCAACCTAGC CAGAGCAGGA CATGCTGTTG AGGACAGAGC TGGGAACATA ATGCTCTGAG 2160
TGGACTGTCC CTGCAGCCAC CTTTTAGATG TCCAGTCCTT GAATCGAGGT AGAAACAGTG 2220
TGTTAGAAAG GTCTCCAAGG CCCAGGTGGA AAGGTTTCTG TAGGAACATG CCTGACTCAG 2280
GTGGAGTTGA CCGTGAACCC TGAATGCCAG TTGGCATCCT CAGGCCAGCA GCCAGCACCT 2340
GGCCACGCCG TCTGCATAAG GTTTGGGCTG GAACCTTCCC TGCTTTCCTT GTCCTGTGGT 2400
CTCACTTGTG CTCTGTTTTC TCTTCCCTTT TCCATCCTTT CTCCCTCTGT CTGGCCATCT 2460
TGGGCGCTGT 2470
|
